PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027172345.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | NAC | ||||||||
Protein Properties | Length: 365aa MW: 41613.8 Da PI: 7.2464 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 172.9 | 9.3e-54 | 10 | 139 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvka.eekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 +ppGfrFhPtdeel+++yL+kkv+ + ++l +vi+evd++k+ePwdL++ ++ + ++ewyfFs++dkky+tg+r+nrat++g+Wkatg+dk++ XP_027172345.1 10 VPPGFRFHPTDEELLHYYLRKKVSYEAIDL-DVIREVDLNKLEPWDLKEkcRIGSgPQNEWYFFSHKDKKYPTGTRTNRATSAGFWKATGRDKAI 103 69****************************.9***************952444443456************************************ PP NAM 93 lskkgelvglkktLvfykgrapkgektdWvmheyrl 128 + +++ +g++ktLvfy grap+g+ktdW+mheyrl XP_027172345.1 104 HLGNSKRIGMRKTLVFYIGRAPHGQKTDWIMHEYRL 139 **********************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 365 aa Download sequence |
MPAATGQFSV PPGFRFHPTD EELLHYYLRK KVSYEAIDLD VIREVDLNKL EPWDLKEKCR 60 IGSGPQNEWY FFSHKDKKYP TGTRTNRATS AGFWKATGRD KAIHLGNSKR IGMRKTLVFY 120 IGRAPHGQKT DWIMHEYRLD DENAEIQEDG WVVCRVFKKK SNTNRGFQPD HELDLRDHEE 180 HEHLTPHMKL AGVSTSSMME PTTRQNSQPL CDYSLVDCSM HLPQLLSPDV AESMSTVVRH 240 HYHHPHHHPP SFLPVPSLNA VVEDLDCNSQ NLLSLTSGSG GCGGGLLQYN EEKFSSDWTF 300 LDKLLASHQS FDQQSKCYSF MSQPATAAHH HHHHVVPSSA QKLPLPIIPF HHVGSGPEFV 360 KFSHK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G79580.1 | 1e-108 | NAC family protein |