PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027172260.1

Organism

Coffea eugenioides

Taxonomic ID

49369

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

NAC

Protein Properties

Length: 358aa MW: 39415.2 Da PI: 7.7777

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027172260.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	179.9	6.7e-56	14	142	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 lppGfrFhPtdeel+++yL kkv +++++ ++i+evd++k+ePw+Lp+k+k +ekewyfFs rd+ky+tg r+nrat++gyWkatgkd+e++s+ XP_027172260.1 14 LPPGFRFHPTDEELITYYLLKKVLDSNFTG-KAIAEVDLNKCEPWELPEKAKMGEKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREIYSS 107 79***********************999.88***********99999************************************97 PP NAM 96 .kgelvglkktLvfykgrapkgektdWvmheyrle 129 + +lvg+kktLvfy+grapkgek++Wvmheyrle XP_027172260.1 108 kTCSLVGMKKTLVFYRGRAPKGEKSNWVMHEYRLE 142 45567**************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 358 aa Download sequence
MANYHYYESS DAHLPPGFRF HPTDEELITY YLLKKVLDSN FTGKAIAEVD LNKCEPWELP 60 EKAKMGEKEW YFFSLRDRKY PTGLRTNRAT EAGYWKATGK DREIYSSKTC SLVGMKKTLV 120 FYRGRAPKGE KSNWVMHEYR LEGKFAYHYL SRSSKDEWVI SRVFQKCGAG AGPGSGGGKK 180 RLAPGINLYP EASSPSSVSL PPLLDSSTYT ATSATSASTT DHESCSYDCN SAKEHVPCFS 240 NSAAASFNHN SLFELPPPPL PPPAPAATLL SSLFDPSPSS GARFPRINAG LSAFPNLRSL 300 QENLHCPFFF PTAAAAAPPP QPINGSDENG IHYGSVTNWA APDNQKVGPT ELDCLWSF

Sequence ? help Back to Top

Protein Sequence Length: 358 aa Download sequence

MANYHYYESS DAHLPPGFRF HPTDEELITY YLLKKVLDSN FTGKAIAEVD LNKCEPWELP  60
EKAKMGEKEW YFFSLRDRKY PTGLRTNRAT EAGYWKATGK DREIYSSKTC SLVGMKKTLV  120
FYRGRAPKGE KSNWVMHEYR LEGKFAYHYL SRSSKDEWVI SRVFQKCGAG AGPGSGGGKK  180
RLAPGINLYP EASSPSSVSL PPLLDSSTYT ATSATSASTT DHESCSYDCN SAKEHVPCFS  240
NSAAASFNHN SLFELPPPPL PPPAPAATLL SSLFDPSPSS GARFPRINAG LSAFPNLRSL  300
QENLHCPFFF PTAAAAAPPP QPINGSDENG IHYGSVTNWA APDNQKVGPT ELDCLWSF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G53950.1	1e-102	NAC family protein