PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027172052.1
Organism
Coffea eugenioides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family bHLH
Protein Properties Length: 359aa    MW: 39801.8 Da    PI: 7.3314
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027172052.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH14.18.8e-052122521055
                     HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH  10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     +r R++i ++   L+++lP++     kK++  ++Le+A +Y+k Lq
  XP_027172052.1 212 KRIRQKISEKTRCLQRVLPWD-----KKMDMGTMLEEAYKYVKFLQ 252
                     4558999999999*******9.....9******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 359 aa     Download sequence    
MERKFPGGGQ LRGYSAGVNA PAMLGLEEAY LNGYFSDLSF QSILQPPCHY DNQSLQQPAV  60
ETPAFSQATY GYYIQDVPES STSTFSEPNP TTYQFLNREE LKTPKHEVLD TQDFAFQLLK  120
LNETTPSPAV SPPEPLINFF STCSSSMDDL SSNSSGGAGQ FVYQTGSLSD IMNVQVQQLT  180
ESSSSSSRFP THRVDPGKRY VPYNLSPKPD RKRIRQKISE KTRCLQRVLP WDKKMDMGTM  240
LEEAYKYVKF LQAQISVLQT MPEKSSTAAI SSSGGKSKNP SYDVSSSGVG ENNVAWGDLG  300
KLNRQQLLEV VVNSRVAQTA LYSRGCCVYS TEQLVLLKKM AEKKTLSEQV LFASPLLFS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G22100.12e-25bHLH family protein