PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027171673.1
Organism
Coffea eugenioides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family ERF
Protein Properties Length: 270aa    MW: 29554.3 Da    PI: 5.4296
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027171673.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP254.13.8e-17115162253
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkl 53 
                     ++kGVr+++  g+WvAeIrdp+    + ++++lg+f +aeeAa+a+++   ++
  XP_027171673.1 115 HFKGVRQRS-AGKWVAEIRDPR----QgRSVWLGTFTSAEEAARAYDRKCIQF 162
                     69****999.8*********94....25*******************876555 PP
Sequence ? help Back to Top
Protein Sequence    Length: 270 aa     Download sequence    
MHRFSDQMSE ELFKDEVDKR MVSAFQHVIS NTEAAAPPTG PAHQQQPTVM AEFEGVTSLS  60
QSSSTASSGL GSSSTGTMME ENDDQSRRNE KQKPKNKKNK KKKREGKLDG ERTVHFKGVR  120
QRSAGKWVAE IRDPRQGRSV WLGTFTSAEE AARAYDRKCI QFRGDRAKTN FPSSDYANAN  180
DDQSSGSQQH QQEGDAPPPA AALLSVNAPA VYTSPLITKT TASASTTNST TTAADAGATS  240
WEEDEDFWDL FQILSDTDWT MLDSPPPSGP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13330.13e-22ERF family protein