PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027171648.1

Organism

Coffea eugenioides

Taxonomic ID

49369

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

FAR1

Protein Properties

Length: 839aa MW: 96301.7 Da PI: 7.474

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027171648.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	73.8	3.7e-23	26	113	1	89
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHel 89 kfYn+YA ++GFsvrk++ +k ++g +++r++ C keg +++ + + + +rtra t+tgC ak+ + + + + k++v++l+leHnHel XP_027171648.1 26 KFYNKYAFKMGFSVRKDYVNKD-KDGVTMSRRYSCCKEGVKRKYEGD-VMPKRTRAPTKTGCGAKMIIVLLSaTMKYRVHDLVLEHNHEL 113 6***************9998.8999************9999.999************999998**************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 839 aa Download sequence
MDCSKLAEDR TPELGMEFNS EEDAYKFYNK YAFKMGFSVR KDYVNKDKDG VTMSRRYSCC 60 KEGVKRKYEG DVMPKRTRAP TKTGCGAKMI IVLLSATMKY RVHDLVLEHN HELHIAQCSH 120 MMPSQRKVSE AQGFQAEISE DAGLSLKQSH ELMGNEAAGM ENVGYTREDL KRYLRTRRER 180 SLKYGEAGSM LNYFQEQTLE NPSFFHAVQL DCEEQITNIF WADAGMLIDY NFFGDVVTFD 240 TTYKTNKEYR SLGVFVGFNQ HRQIVIFGAA LMYDETIDSF KWVFGTFLEA MCGKRPSTIL 300 TDQDHAMAAA LSVVMPETFH GLCTFHIRRN FMKHLGNHYK ENSDLPYMFG ACMYEFEEVE 360 QFNRVWEAMV KKHNLENNEW LSGLYRIRDK WARCMMKERW TAGMRSTQLS ESLNAAIKNH 420 LKLDHDLVQF FRHFNRVVDE KRHNELIAEY EMRQKLPMVG LRQTPMFVHA SETYSPTIFV 480 AFQNEYGEST AMVILRQQDA GMFVEFTVMR YDGGVERIVV FNRNDVSVRC SCKKYENEGI 540 LCGHALKVFD TVGIKIIPPE YVKRRWTKRA RAGDCFDRQG WEIVADPKVI VSTRYRELAP 600 AMIKVAARAA MSEDTSKIVI TVISDLAKKV ELLLSENEGQ PLQNPKNLNV EERDKIEIVN 660 EMGEAVVARG IKKRAGGKKS RVKRNWIDKF DRVKRKSRLS RTTQTTVSES EPTSVSVEEH 720 MFMGCRSSTD SVSVHSMSQT VNGPPNAVAP EIDESETVLR LANQGPPGSV PTEWMHPQFS 780 IFSKHNSVRN ILMEELVAIS THCDVDQYHV FTPSSQGRNN TQGLQVRVDV ASAENEVNE

Sequence ? help Back to Top

Protein Sequence Length: 839 aa Download sequence

MDCSKLAEDR TPELGMEFNS EEDAYKFYNK YAFKMGFSVR KDYVNKDKDG VTMSRRYSCC  60
KEGVKRKYEG DVMPKRTRAP TKTGCGAKMI IVLLSATMKY RVHDLVLEHN HELHIAQCSH  120
MMPSQRKVSE AQGFQAEISE DAGLSLKQSH ELMGNEAAGM ENVGYTREDL KRYLRTRRER  180
SLKYGEAGSM LNYFQEQTLE NPSFFHAVQL DCEEQITNIF WADAGMLIDY NFFGDVVTFD  240
TTYKTNKEYR SLGVFVGFNQ HRQIVIFGAA LMYDETIDSF KWVFGTFLEA MCGKRPSTIL  300
TDQDHAMAAA LSVVMPETFH GLCTFHIRRN FMKHLGNHYK ENSDLPYMFG ACMYEFEEVE  360
QFNRVWEAMV KKHNLENNEW LSGLYRIRDK WARCMMKERW TAGMRSTQLS ESLNAAIKNH  420
LKLDHDLVQF FRHFNRVVDE KRHNELIAEY EMRQKLPMVG LRQTPMFVHA SETYSPTIFV  480
AFQNEYGEST AMVILRQQDA GMFVEFTVMR YDGGVERIVV FNRNDVSVRC SCKKYENEGI  540
LCGHALKVFD TVGIKIIPPE YVKRRWTKRA RAGDCFDRQG WEIVADPKVI VSTRYRELAP  600
AMIKVAARAA MSEDTSKIVI TVISDLAKKV ELLLSENEGQ PLQNPKNLNV EERDKIEIVN  660
EMGEAVVARG IKKRAGGKKS RVKRNWIDKF DRVKRKSRLS RTTQTTVSES EPTSVSVEEH  720
MFMGCRSSTD SVSVHSMSQT VNGPPNAVAP EIDESETVLR LANQGPPGSV PTEWMHPQFS  780
IFSKHNSVRN ILMEELVAIS THCDVDQYHV FTPSSQGRNN TQGLQVRVDV ASAENEVNE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-108	FAR1 family protein