PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027171426.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | FAR1 | ||||||||
Protein Properties | Length: 176aa MW: 19895.8 Da PI: 9.1573 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 56.4 | 1e-17 | 81 | 171 | 1 | 90 |
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 +fY Y + +G vrk +++k +ng + r +vC+keg+r+e++ + +++ r+++a r++Cka++k++ ++ ++k++v+++++ H H l+ XP_027171426.1 81 SFYMLYPRAIGIGVRKGYKRKD-KNGIVCLRSWVCNKEGERHEKHINkRDRIREPKAIRRVNCKARFKIRFDHvKQKYVVEEFVSRHCHRLC 171 59***************99998.8888999***********99987746778899******************9*****************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 176 aa Download sequence |
MAIGQASSSR YIALNDKVED NGNRCKIINS TTCCIADRVT GQGDAGEHVS IGGGNEIAAF 60 GVIDDADVCS MVFESTKEAE SFYMLYPRAI GIGVRKGYKR KDKNGIVCLR SWVCNKEGER 120 HEKHINKRDR IREPKAIRRV NCKARFKIRF DHVKQKYVVE EFVSRHCHRL CSPESV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G38180.1 | 1e-12 | FAR1 family protein |