PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027171229.1
Organism
Coffea eugenioides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family BES1
Protein Properties Length: 319aa    MW: 34248.2 Da    PI: 8.853
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027171229.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF8222091.3e-6421441149
          DUF822   1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagssasaspesslq 95 
                     ++++r ptwkErEnnkrRERrRRaiaa i+aGLR++Gnyklpk++DnneVlkALc+eAGw ve+DGttyrkg+kp ++++++g s+sasp+ss++
  XP_027171229.1   2 TSGTRLPTWKERENNKRRERRRRAIAANIFAGLRMYGNYKLPKHCDNNEVLKALCNEAGWSVEPDGTTYRKGCKPVDRMDIMGGSTSASPCSSYH 96 
                     5899******************************************************************************************* PP

          DUF822  96 sslkssalaspvesysaspksssfpspssldsislasa..asllpvlsvlslvsss 149
                             +sp +sy++sp+sssfpsp+s+  + + +   +sl+p+l++ls++sss
  XP_027171229.1  97 --------PSPGTSYNPSPASSSFPSPASSPYAANINGdgNSLIPWLKNLSSSSSS 144
                     ........*******************9987665544456**********997776 PP
Sequence ? help Back to Top
Protein Sequence    Length: 319 aa     Download sequence    
MTSGTRLPTW KERENNKRRE RRRRAIAANI FAGLRMYGNY KLPKHCDNNE VLKALCNEAG  60
WSVEPDGTTY RKGCKPVDRM DIMGGSTSAS PCSSYHPSPG TSYNPSPASS SFPSPASSPY  120
AANINGDGNS LIPWLKNLSS SSSSTSSTKF QLLYHGGSIS APVTPPLSSP TARTPRLKTD  180
WDDSSARASW GSHSPFLPLS TPPSPGRQAP PDSEWFAGMQ IPQGGPTSPT FSLVSANPFA  240
FKFESLRHSG SRMCTPGQSG TCSPAIPAGS DVPMAEVISD EFAFRSIKGG LVKPWEGERI  300
HEDCGSDDLE LTLGSSKTR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G78700.11e-109BES1 family protein