PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027170986.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | G2-like | ||||||||
Protein Properties | Length: 440aa MW: 47572.3 Da PI: 8.4146 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 106.5 | 1.5e-33 | 34 | 88 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kprlrWt eLHerFv+av+qLGG++kAtPkti+++m+vkgLtl+h+kSHLQk+Rl XP_027170986.1 34 KPRLRWTVELHERFVDAVTQLGGPDKATPKTIMRVMGVKGLTLYHLKSHLQKFRL 88 79****************************************************8 PP | |||||||
2 | Myb_DNA-binding | 72.1 | 8.4e-23 | 36 | 87 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT e++e++vdav+qlGg+ t+ktI+r mg kg+tl+++ks++qk++ XP_027170986.1 36 RLRWTVELHERFVDAVTQLGGPdkaTPKTIMRVMGvKGLTLYHLKSHLQKFR 87 89************************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 440 aa Download sequence |
MFHTKKPASA MNSHERPMSC VQGDSGLVLT TDPKPRLRWT VELHERFVDA VTQLGGPDKA 60 TPKTIMRVMG VKGLTLYHLK SHLQKFRLGK QPHKEFSDHP IKDASTLELQ RSSSASSSGM 120 IGRSMNDNVR ITDAIRMQME VQRRLHEQLE VQRHLQLRIE AQGKYMQTIL EKACQTLAGE 180 NMASAAAAGS YNKGGNQAGG GVVDIKEFGP PLSFPSLQDL NIYGSGEQLE LQQGGMVVDR 240 SPSLDGFMSN NNDTQLCHLG KKRPTPPSPY GGGSGKSPAS LMWSDHHHHH HHDLRLQELG 300 SAAASCLGNS QDHHHHHDPF KGDHHHQIQM NNAAGGAGVL SLERSNVDVV IDSMSDSTCS 360 NMYETKPLIS GSCGSDGGMV LGGTDQKNAS SKLERPSPRR ASTTATTPPP SSSSDHRMNP 420 VQIGTGAAGA MSQARNSPFG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G79430.2 | 6e-91 | G2-like family protein |