PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027170842.1

Organism

Coffea eugenioides

Taxonomic ID

49369

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

WRKY

Protein Properties

Length: 730aa MW: 78649.9 Da PI: 6.3657

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027170842.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	104.3	6.8e-33	316	373	2	60
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 +DgynWrKYGqK+vkgse+prsYY+Ct+++Cpvkkkvers+ +++++ei+Y+g Hnh+k XP_027170842.1 316 EDGYNWRKYGQKQVKGSEYPRSYYKCTHPNCPVKKKVERSQ-EGHITEIIYKGAHNHPK 373 8**************************************.*************85 PP
2	WRKY	103.7	1e-32	525	583	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+vkg+++prsYY+CtsagC+v+k+ver+++d k v++tYeg+Hnh+ XP_027170842.1 525 LDDGYRWRKYGQKVVKGNPNPRSYYKCTSAGCTVRKHVERASHDLKSVITTYEGKHNHD 583 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 730 aa Download sequence
MGEFDDHVAI IGDWMPPSPS PRALFSTLLG DDVSLRMVAE PTSENKAGFS FPGPVEHSAS 60 ASSDQKDGSQ GGAAVDQTGK FSSMSEQRMS SRGGLMERMA ARAGFNAPRL NTESIRPPDL 120 SQNLEVRSPY LTIPPGLSPT TLLDSPVFLT NSLVQPSPTT GKLGFLMSGS SRNATVTEFP 180 DKSKENCFQN VNTSSFAFRP ILESGPPLFF GASNRITSTN LPQQPFPSIE VSVQSGNTLP 240 PRSVEHAKSA ALNQPADFSR PSAAKDTVHN DILSEPSSFQ NVGGGSEHSP PLDEQQEDDA 300 DQRGGGDQNI SGAPAEDGYN WRKYGQKQVK GSEYPRSYYK CTHPNCPVKK KVERSQEGHI 360 TEIIYKGAHN HPKPPPNRRS ALGSSNTLSD LQVENSEQVA MGADGNPGWT TMQKGNFDWR 420 HDNLEETSSA ALGPEYGNGT TSLQAQNGSQ LESGDGVDGS STFSNDEDDE DRGTHGSVSL 480 GYDEGDESES KRRKIESYAT DMSGATRAIR EPRVVVQTTS EVDILDDGYR WRKYGQKVVK 540 GNPNPRSYYK CTSAGCTVRK HVERASHDLK SVITTYEGKH NHDVPAARNS SHVNSGISGT 600 LPAQAGAAVQ SHVHRPEPSQ LHNCIAQFER PPLGSFALPG RPPLGPTHGF GFGMNQQGLP 660 NMTLAGLGPP NQGKIPALPV HPYLGQPRPM NEMGRMLPKG EPKMEPMSDP GLNLSNGSSV 720 YHMSRLPLGP

Sequence ? help Back to Top

Protein Sequence Length: 730 aa Download sequence

MGEFDDHVAI IGDWMPPSPS PRALFSTLLG DDVSLRMVAE PTSENKAGFS FPGPVEHSAS  60
ASSDQKDGSQ GGAAVDQTGK FSSMSEQRMS SRGGLMERMA ARAGFNAPRL NTESIRPPDL  120
SQNLEVRSPY LTIPPGLSPT TLLDSPVFLT NSLVQPSPTT GKLGFLMSGS SRNATVTEFP  180
DKSKENCFQN VNTSSFAFRP ILESGPPLFF GASNRITSTN LPQQPFPSIE VSVQSGNTLP  240
PRSVEHAKSA ALNQPADFSR PSAAKDTVHN DILSEPSSFQ NVGGGSEHSP PLDEQQEDDA  300
DQRGGGDQNI SGAPAEDGYN WRKYGQKQVK GSEYPRSYYK CTHPNCPVKK KVERSQEGHI  360
TEIIYKGAHN HPKPPPNRRS ALGSSNTLSD LQVENSEQVA MGADGNPGWT TMQKGNFDWR  420
HDNLEETSSA ALGPEYGNGT TSLQAQNGSQ LESGDGVDGS STFSNDEDDE DRGTHGSVSL  480
GYDEGDESES KRRKIESYAT DMSGATRAIR EPRVVVQTTS EVDILDDGYR WRKYGQKVVK  540
GNPNPRSYYK CTSAGCTVRK HVERASHDLK SVITTYEGKH NHDVPAARNS SHVNSGISGT  600
LPAQAGAAVQ SHVHRPEPSQ LHNCIAQFER PPLGSFALPG RPPLGPTHGF GFGMNQQGLP  660
NMTLAGLGPP NQGKIPALPV HPYLGQPRPM NEMGRMLPKG EPKMEPMSDP GLNLSNGSSV  720
YHMSRLPLGP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G56270.1	0.0	WRKY family protein