PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027170019.1

Organism

Coffea eugenioides

Taxonomic ID

49369

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

WRKY

Protein Properties

Length: 631aa MW: 68331.8 Da PI: 6.2717

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027170019.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	99	3e-31	275	332	2	60
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 dDgynWrKYGqK vkgsefprsYY+Ct+++C+vkk ers +++++ei+Y+g+H+h+k XP_027170019.1 275 DDGYNWRKYGQKLVKGSEFPRSYYKCTYPNCEVKKIFERSP-EGQITEIVYKGSHDHPK 332 8**************************************.*************85 PP
2	WRKY	107.1	8.5e-34	447	505	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+v+g+++prsYY+Ct+agCpv+k+ver+++dpk+v++tYeg+Hnh+ XP_027170019.1 447 LDDGYRWRKYGQKVVRGNPNPRSYYKCTHAGCPVRKHVERASHDPKAVITTYEGKHNHD 505 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 631 aa Download sequence
MEEASSLQSR YHSPHAFELL QQQQVEEQQS GACSNVEMDG RLTSSLQRVR DGNGNYSEAA 60 AAYHHSAAAA AGGGGAKYKL MSPAKLPISR SPCTLTIPPG LSPTSFLESP VLLSNIKAEP 120 SPTTGTFSMP QMMQGCSGTS GFSYLTNCSS LNTVNKTNSC NFEFQFHADS GDAAGLRPIG 180 LAVSSGLVQQ HNESLGQVPD LGLPQSLVSS SLVKHEVVMA KESNFSAPTT ISDSATTAVD 240 SDVLNQKNHP NISNQVSNSD SKDTTSSVAN DRSSDDGYNW RKYGQKLVKG SEFPRSYYKC 300 TYPNCEVKKI FERSPEGQIT EIVYKGSHDH PKPQPSRRFT PGALLSIQEE KFDKDSTFTG 360 QEDKLNVNSQ NTSVEPNSTP LPSPQQENDD GLDGTLSKLQ CVNDEIDEDD PFSKRRKLDG 420 SLDVTPVVKP IREPRVVVQT VSEVDILDDG YRWRKYGQKV VRGNPNPRSY YKCTHAGCPV 480 RKHVERASHD PKAVITTYEG KHNHDVPTAR TSSHEMAGPA TMGAMSRIRS EEDDPLSLDL 540 GVGISYGAEH RPDAQLQMLN SEPLQSQVRA AASTRMVVQA STLPACYGVV NGGITLYGSK 600 ENLDEGGGFG TAPLRSSNQC PQNLGRIILG P

Sequence ? help Back to Top

Protein Sequence Length: 631 aa Download sequence

MEEASSLQSR YHSPHAFELL QQQQVEEQQS GACSNVEMDG RLTSSLQRVR DGNGNYSEAA  60
AAYHHSAAAA AGGGGAKYKL MSPAKLPISR SPCTLTIPPG LSPTSFLESP VLLSNIKAEP  120
SPTTGTFSMP QMMQGCSGTS GFSYLTNCSS LNTVNKTNSC NFEFQFHADS GDAAGLRPIG  180
LAVSSGLVQQ HNESLGQVPD LGLPQSLVSS SLVKHEVVMA KESNFSAPTT ISDSATTAVD  240
SDVLNQKNHP NISNQVSNSD SKDTTSSVAN DRSSDDGYNW RKYGQKLVKG SEFPRSYYKC  300
TYPNCEVKKI FERSPEGQIT EIVYKGSHDH PKPQPSRRFT PGALLSIQEE KFDKDSTFTG  360
QEDKLNVNSQ NTSVEPNSTP LPSPQQENDD GLDGTLSKLQ CVNDEIDEDD PFSKRRKLDG  420
SLDVTPVVKP IREPRVVVQT VSEVDILDDG YRWRKYGQKV VRGNPNPRSY YKCTHAGCPV  480
RKHVERASHD PKAVITTYEG KHNHDVPTAR TSSHEMAGPA TMGAMSRIRS EEDDPLSLDL  540
GVGISYGAEH RPDAQLQMLN SEPLQSQVRA AASTRMVVQA STLPACYGVV NGGITLYGSK  600
ENLDEGGGFG TAPLRSSNQC PQNLGRIILG P

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G26640.2	1e-157	WRKY family protein