PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027169437.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | FAR1 | ||||||||
Protein Properties | Length: 120aa MW: 13984.2 Da PI: 8.7844 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 73.6 | 4.2e-23 | 26 | 113 | 1 | 89 |
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHel 89 kfYn+YA ++GFsvrk++ +k ++g +t++++ C ke +++ +++ + +rtra +tgC ak+++ + + + k++v++l+leHnHel XP_027169437.1 26 KFYNKYAFKMGFSVRKDYLNKD-KDGMTTSKRYSCCKECVKRKYESD-VMPKRTRAPMKTGCGAKMVIVLFRgTMKYRVHDLVLEHNHEL 113 6******************998.8888*************9999999.9999******************999****************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 120 aa Download sequence |
MDCSKLAEDG TPELGMEFNS EEDAYKFYNK YAFKMGFSVR KDYLNKDKDG MTTSKRYSCC 60 KECVKRKYES DVMPKRTRAP MKTGCGAKMV IVLFRGTMKY RVHDLVLEHN HELHITQCAQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G59470.2 | 1e-14 | FAR1 family protein |