PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027169396.1

Organism

Coffea eugenioides

Taxonomic ID

49369

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

FAR1

Protein Properties

Length: 775aa MW: 88676.2 Da PI: 7.9774

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027169396.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	74.4	2.3e-23	26	113	1	89
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHel 89 +fYn+YA ++GFsvrk++ +k ++g +t+r++ C keg +++ + + + +rtra t+tgC ak+++ + + + k++v++l+leHnHel XP_027169396.1 26 NFYNKYAFKMGFSVRKDYLNKD-KDGVTTSRRYSCCKEGVKHKYEGD-VMPKRTRAPTKTGCGAKMVIVLFRgTMKYRVHDLVLEHNHEL 113 6***************9998.8999************9999.999***************999**************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 775 aa Download sequence
MDCSKLAENG TPELGMEFNS EEDAYNFYNK YAFKMGFSVR KDYLNKDKDG VTTSRRYSCC 60 KEGVKHKYEG DVMPKRTRAP TKTGCGAKMV IVLFRGTMKY RVHDLVLEHN HELHIAQCAH 120 MMPSQRKVSV AQGFQAEISE DAGLSLKQSH ELMGTEAGGM GMLIDYNIFG DVVTFDTTYK 180 TNKEYRPLGV FVGFNQHRQI VIFGAALMYD ETIDSFKWVF GTFLEAMCGK HPSTILTDQD 240 HAMTAALSIV MPETFHGLCT FHIRRNFMKH LGNHYKKNSD LPYMFGACMY EFEEVEQFNR 300 VWEAMVKKHN LENNEWLSGL YKIRDKWARC MMKERWTAGM RSTQLSESLN AAIKNHLKLD 360 HDLVQFFRHF NRVVDEKRHN ELIAEYEMRH KLPMVGLRQT PMLVHASETY SPTVFVAFQN 420 EYGESTAMVI LRQQDAAMFV EFAVMRYDGG PERIVVFNRN DLSVRCSCKK YENEGILCGH 480 ALKVFDTVGI KIIPPEYIKR RWTKRARAGD CFDRRGQEVV ADPKVMISTR YRELAPAMIK 540 VATRAAMSED TSKVAITVIS DLSKRVELLL SESEEQPLQN QKNLNMEERD KIEIVNEMGE 600 AVVARGIKKR GGGKKSRVMR SWVDKFDRVK RKSRLSRTTQ TTVSESEPTS ISFEEYMFMG 660 CRSSTDSVST HSMSQTVNGP PNAVAPDIDE SQTVHRLANQ GPPASVPTEW MHPRFSIFSK 720 HNSVRDVLME ERGAISTHCD VDAYHVFAPS PQERNNTQGL QLRVDVASPQ NEVDE

Sequence ? help Back to Top

Protein Sequence Length: 775 aa Download sequence

MDCSKLAENG TPELGMEFNS EEDAYNFYNK YAFKMGFSVR KDYLNKDKDG VTTSRRYSCC  60
KEGVKHKYEG DVMPKRTRAP TKTGCGAKMV IVLFRGTMKY RVHDLVLEHN HELHIAQCAH  120
MMPSQRKVSV AQGFQAEISE DAGLSLKQSH ELMGTEAGGM GMLIDYNIFG DVVTFDTTYK  180
TNKEYRPLGV FVGFNQHRQI VIFGAALMYD ETIDSFKWVF GTFLEAMCGK HPSTILTDQD  240
HAMTAALSIV MPETFHGLCT FHIRRNFMKH LGNHYKKNSD LPYMFGACMY EFEEVEQFNR  300
VWEAMVKKHN LENNEWLSGL YKIRDKWARC MMKERWTAGM RSTQLSESLN AAIKNHLKLD  360
HDLVQFFRHF NRVVDEKRHN ELIAEYEMRH KLPMVGLRQT PMLVHASETY SPTVFVAFQN  420
EYGESTAMVI LRQQDAAMFV EFAVMRYDGG PERIVVFNRN DLSVRCSCKK YENEGILCGH  480
ALKVFDTVGI KIIPPEYIKR RWTKRARAGD CFDRRGQEVV ADPKVMISTR YRELAPAMIK  540
VATRAAMSED TSKVAITVIS DLSKRVELLL SESEEQPLQN QKNLNMEERD KIEIVNEMGE  600
AVVARGIKKR GGGKKSRVMR SWVDKFDRVK RKSRLSRTTQ TTVSESEPTS ISFEEYMFMG  660
CRSSTDSVST HSMSQTVNGP PNAVAPDIDE SQTVHRLANQ GPPASVPTEW MHPRFSIFSK  720
HNSVRDVLME ERGAISTHCD VDAYHVFAPS PQERNNTQGL QLRVDVASPQ NEVDE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	7e-81	FAR1 family protein