PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027169197.1

Organism

Coffea eugenioides

Taxonomic ID

49369

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

FAR1

Protein Properties

Length: 575aa MW: 66695.3 Da PI: 7.9579

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027169197.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	75.5	1.1e-23	11	99	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 +fY++YAk+ GF +r sk +k k+++ + +r f+Cs egkr ++k++ + +raetr++C a++k++ ++ +k++v +++ +HnHel+ XP_027169197.1 11 NFYQKYAKTSGFGTRLSKGHKDKNSDMMLDRVFCCSHEGKRPKDKRN-MVVKCPRAETRCDCGARMKISCRQAEKYRVVQFVAQHNHELS 99 6****************************************9999.9999**********************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 575 aa Download sequence
MEFDTEVAAG NFYQKYAKTS GFGTRLSKGH KDKNSDMMLD RVFCCSHEGK RPKDKRNMVV 60 KCPRAETRCD CGARMKISCR QAEKYRVVQF VAQHNHELST PSKTHLFRSH RHMTMAHEAE 120 IDMARSCGIA PKQSIELMSK QVGGRENLGF IRDDLKNYLR SKRSIPMMQG DTGGVLEYLQ 180 RMQLEDPNFY YAIQVDEDDL ITNIFWADAK MRTDFTHFGD VVCFDTTYRK HKDGRPIALF 240 VGVNHHKQTI VFGGALLYDE TIGTFEWLFD TFAKAMMGKI PRTILTDQDG RMATALASQW 300 PTNHCIYDYE NENDFLEGWS EMLKMYCLED NKWLKKMFDI KEKWALVYGR ETFCADMTTT 360 QRSESMNSVI KKYVSYKHDL LEFFEHFQRL LDDRRYDESV TDFRGNQSTP AVTFPCKILQ 420 HAASVYTHEV YERFKDELCK GIDCKWEVDG ELGKQVIYRV TPYGKTSHHL VTYDSSKNSI 480 SCSCKKFEFA GFLCSHALKI LMTLNIVTIP DAYILKRWTK AAKIGNVCVS SESSQEMESK 540 AKLSFRYKEL SYLYMQLMTK TSECDEAYKI AKDGF

Sequence ? help Back to Top

Protein Sequence Length: 575 aa Download sequence

MEFDTEVAAG NFYQKYAKTS GFGTRLSKGH KDKNSDMMLD RVFCCSHEGK RPKDKRNMVV  60
KCPRAETRCD CGARMKISCR QAEKYRVVQF VAQHNHELST PSKTHLFRSH RHMTMAHEAE  120
IDMARSCGIA PKQSIELMSK QVGGRENLGF IRDDLKNYLR SKRSIPMMQG DTGGVLEYLQ  180
RMQLEDPNFY YAIQVDEDDL ITNIFWADAK MRTDFTHFGD VVCFDTTYRK HKDGRPIALF  240
VGVNHHKQTI VFGGALLYDE TIGTFEWLFD TFAKAMMGKI PRTILTDQDG RMATALASQW  300
PTNHCIYDYE NENDFLEGWS EMLKMYCLED NKWLKKMFDI KEKWALVYGR ETFCADMTTT  360
QRSESMNSVI KKYVSYKHDL LEFFEHFQRL LDDRRYDESV TDFRGNQSTP AVTFPCKILQ  420
HAASVYTHEV YERFKDELCK GIDCKWEVDG ELGKQVIYRV TPYGKTSHHL VTYDSSKNSI  480
SCSCKKFEFA GFLCSHALKI LMTLNIVTIP DAYILKRWTK AAKIGNVCVS SESSQEMESK  540
AKLSFRYKEL SYLYMQLMTK TSECDEAYKI AKDGF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G15090.1	1e-114	FAR1 family protein