PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027168991.1

Organism

Coffea eugenioides

Taxonomic ID

49369

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

NAC

Protein Properties

Length: 243aa MW: 28094.3 Da PI: 4.5838

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027168991.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	177.3	4.3e-55	6	133	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 lppGfrFhPtdeelv++yLk+k++g+++el ++i+evd+yk+ePw+L k + +++ ewyfF +rd+ky++g r+nrat++gyWk+tgkd++v XP_027168991.1 6 LPPGFRFHPTDEELVNYYLKRKIHGQEIEL-DIIPEVDLYKCEPWELAeKsFLPSRDPEWYFFGPRDRKYPNGFRTNRATRAGYWKSTGKDRKVS 99 79**************************.99**********84335556888********************************* PP NAM 94 skkgelvglkktLvfykgrapkgektdWvmheyrl 128 s +++ +g+kktLv+y+grap+g +tdWvmheyrl XP_027168991.1 100 S-QNRPIGMKKTLVYYRGRAPQGIRTDWVMHEYRL 133 9.999**************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 243 aa Download sequence
MAPVGLPPGF RFHPTDEELV NYYLKRKIHG QEIELDIIPE VDLYKCEPWE LAEKSFLPSR 60 DPEWYFFGPR DRKYPNGFRT NRATRAGYWK STGKDRKVSS QNRPIGMKKT LVYYRGRAPQ 120 GIRTDWVMHE YRLDDKECEE TSGIQVDSYA LCRVFKKNGV CTEIEEQQGQ SSLSLLDYSQ 180 GVVNDYETMS PDVPLASSTS CMEEEDKEDK DDSWMQFITD DAWCSSTAPF VGQEEVSQVA 240 FTN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G17730.1	1e-124	NAC family protein