PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027167941.1
Organism
Coffea eugenioides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family NAC
Protein Properties Length: 373aa    MW: 42119.8 Da    PI: 6.2611
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027167941.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM98.11.3e-30181561128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkk...leleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratk..sgyWkatgkdk 90 
                     +p G++F P+d el+++yL +kv+g          +i+e+d+y+++P +Lp  ++++e ++yfF++rd +y++++r+ r+tk  +g W+ t k +
  XP_027167941.1  18 VPIGYKFVPSDYELLKYYLLPKVRGGFtlpAAGLGIIREADVYQSHPANLP-GLDKGEASCYFFTTRDLRYENSERTARTTKdgRGHWRMTSKRT 111
                     589*********************997654344468***************.6778899********************99955667******** PP

             NAM  91 evlskkgelvglkktLvfy.......kgrapkgektdWvmheyrl 128
                     +++++++++ g k+tLv++          ++k  kt+W+mhe+ l
  XP_027167941.1 112 PLFEADRSNLGRKNTLVYHltkppgpGVPSNKDLKTNWIMHEFVL 156
                     *******************766655334566667*********87 PP
Sequence ? help Back to Top
Protein Sequence    Length: 373 aa     Download sequence    
MALFGSLVFY QLEWNKFVPI GYKFVPSDYE LLKYYLLPKV RGGFTLPAAG LGIIREADVY  60
QSHPANLPGL DKGEASCYFF TTRDLRYENS ERTARTTKDG RGHWRMTSKR TPLFEADRSN  120
LGRKNTLVYH LTKPPGPGVP SNKDLKTNWI MHEFVLDRSL YDCCQIPSAS TNKLKQVVLC  180
RIYERNKAEA EQEKSRTDQD STSLRIRDAG DSSAGIERRE TCTKRKQRPT STPEKGTSSC  240
NHHKSVALFD QEGLPSSPPK RSRLVMVEQD ESRMRCKEEN GLEGNSRNDE EEDVQSRIGC  300
IEDNESGHLM ASVNQEEEEE EESRITTMNG GHIEEGNESS QELHPANAGT EENSTASGDC  360
FNSINKLAKY TKA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G61110.16e-25NAC family protein