PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027167435.1

Organism

Coffea eugenioides

Taxonomic ID

49369

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

WRKY

Protein Properties

Length: 318aa MW: 35201.3 Da PI: 8.1212

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027167435.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	94.2	9.1e-30	160	219	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 ++Dgy+WrKYGqK+ ++++ pr+Y++C++a +Cpvkkkv+rs ed+++++ tYegeHnh+ XP_027167435.1 160 VKDGYQWRKYGQKVTRDNPSPRAYFKCSFApSCPVKKKVQRSVEDQSILVATYEGEHNHP 219 58*************************99**************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 318 aa Download sequence
MDYTSLVDTS LDLNIKPLRL LDDGLKQEVQ SNLIGGTTVP VNEEAGALVE ELNRVSAENK 60 KLTEMLTVLC ENYNALRNHL MDYMSKNPGT DNNNGSRKRK SESTTTNNNN DTIIDAATNG 120 PSESSSSDEA SCKKPREEHI KAKVSRVYAR TEPSDTSLIV KDGYQWRKYG QKVTRDNPSP 180 RAYFKCSFAP SCPVKKKVQR SVEDQSILVA TYEGEHNHPH PSKMDQTPSN STRCVTLGSV 240 PCSTSLSSSG PTITLDLTKP KSHEETRNSS TRKVNSPEIQ QYIIEQMASS LTKDPSFKAA 300 LAAAISGKFL QHNQTEKW

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	96	101	SRKRKS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G80840.1	1e-97	WRKY family protein