PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027167168.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | bHLH | ||||||||
Protein Properties | Length: 274aa MW: 29912.8 Da PI: 6.9137 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 29.7 | 1.2e-09 | 160 | 207 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L++l+P + +k Ka + + ++YI+sLq XP_027167168.1 160 SHSLAERARREKISERMKILQDLVPGC----NKVIGKALVIDEIINYIQSLQ 207 8*************************9....677*****************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 274 aa Download sequence |
MDPPIVSHSS FSPAHASSSY TLTDLWPFPI GPPAVLGLPM PPALPPPHAT PPPVAALSLE 60 ESTVTDLSAC RTNATNKRKH VLSQHHLLAS ASCAVHSNNA NVKRMKASEG GIGEQIDESK 120 AEPQTSSYTT NKPADHDDTN PQPPKDYIHV RARRGQATDS HSLAERARRE KISERMKILQ 180 DLVPGCNKVI GKALVIDEII NYIQSLQRQV EFLSMKLEAV NSRMNSAIEG FPSKELAAPQ 240 FDAAAMIFGQ QAPREYAPDE WLHMQVGSSF ERAT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G59640.1 | 4e-70 | bHLH family protein |