PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027166200.1

Organism

Coffea eugenioides

Taxonomic ID

49369

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

FAR1

Protein Properties

Length: 839aa MW: 96600 Da PI: 7.5925

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027166200.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	68.2	2e-21	26	113	1	89
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHel 89 kfYn+YA ++ Fsvrk++ +k ++g +t r++ C keg +++ + + + +rtra t+tgC ak+++ + + + k++v++l+leHnHel XP_027166200.1 26 KFYNKYAFKMDFSVRKDYLNKD-KDGVTTFRRYSCCKEGVKRKYEGD-VMPKRTRAPTKTGCGAKMVIVLFRgTMKYRVHDLVLEHNHEL 113 6***************9998.8899************9999.999***************999**************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 839 aa Download sequence
MDCSKLAENG TPELGMEFNS EEDAYKFYNK YAFKMDFSVR KDYLNKDKDG VTTFRRYSCC 60 KEGVKRKYEG DVMPKRTRAP TKTGCGAKMV IVLFRGTMKY RVHDLVLEHN HELHIAQCAH 120 MMPSQRKVSM AQRFQAEISE DAGLSLKQSH ELMGTEAGGM GNVGYIRDDL KRYLRTRRER 180 SLKYGEAGSM LNYFQEQTLE NPSFFHAVQL DCEEQITNIF WTDAGMLIDY NFFGDVVTFD 240 TTYKTNKEYR PLGVFVGFNQ YRQIVIFGAA LMYDETIDSF KWVFGIFLEA MCGKHPSTIL 300 TDQDHAMTAA LSIAMPETFH GLCTFHIRRN FMKHLGNHYK ENSDIPYMFG ACMYEFEEVE 360 QFNRVWEAMV QKHNLENNEW LSGLYKIRDK WARCMMKERW TAGMRSTQLS ESLNAAIKNH 420 LKLDHDLVQF FRHFNRVVDE KRHNELIAEY EMRQKLPMVG LRQTPMLVHA SETYSPTVFV 480 AFQNEYGEST AMVILRQQDA AMFVEFAVMR YDGGPERTVV FNRNDLSVRC SCKKYENEGI 540 LCGHALKVFD TVGIKIIPPE YIKRRWTKRA RAGDCFDRRG QEVVADPKVM ISTRYRELAP 600 AMIKVATRAA MSEDTSKVAI TVISDLSKRV ELLLSESEEQ PLQNQKNLNM EERDKIEIVN 660 EMGEAVVARG IKKRGGGKKS RVMRSWVDKF DRVKRKSRLS RTTQTTVSES EPTSISFEEY 720 MFMGCRSSTD SVSTHSMSQT VNGPPNAVAP DIDESQTVHR LANQGPPASV PTEWMHPRFS 780 IFSKHNSVRD VLMEERGAIS THCDVDAYHV FAPSPQERNN TQGLQLRVDV ASPQNEVDE

Sequence ? help Back to Top

Protein Sequence Length: 839 aa Download sequence

MDCSKLAENG TPELGMEFNS EEDAYKFYNK YAFKMDFSVR KDYLNKDKDG VTTFRRYSCC  60
KEGVKRKYEG DVMPKRTRAP TKTGCGAKMV IVLFRGTMKY RVHDLVLEHN HELHIAQCAH  120
MMPSQRKVSM AQRFQAEISE DAGLSLKQSH ELMGTEAGGM GNVGYIRDDL KRYLRTRRER  180
SLKYGEAGSM LNYFQEQTLE NPSFFHAVQL DCEEQITNIF WTDAGMLIDY NFFGDVVTFD  240
TTYKTNKEYR PLGVFVGFNQ YRQIVIFGAA LMYDETIDSF KWVFGIFLEA MCGKHPSTIL  300
TDQDHAMTAA LSIAMPETFH GLCTFHIRRN FMKHLGNHYK ENSDIPYMFG ACMYEFEEVE  360
QFNRVWEAMV QKHNLENNEW LSGLYKIRDK WARCMMKERW TAGMRSTQLS ESLNAAIKNH  420
LKLDHDLVQF FRHFNRVVDE KRHNELIAEY EMRQKLPMVG LRQTPMLVHA SETYSPTVFV  480
AFQNEYGEST AMVILRQQDA AMFVEFAVMR YDGGPERTVV FNRNDLSVRC SCKKYENEGI  540
LCGHALKVFD TVGIKIIPPE YIKRRWTKRA RAGDCFDRRG QEVVADPKVM ISTRYRELAP  600
AMIKVATRAA MSEDTSKVAI TVISDLSKRV ELLLSESEEQ PLQNQKNLNM EERDKIEIVN  660
EMGEAVVARG IKKRGGGKKS RVMRSWVDKF DRVKRKSRLS RTTQTTVSES EPTSISFEEY  720
MFMGCRSSTD SVSTHSMSQT VNGPPNAVAP DIDESQTVHR LANQGPPASV PTEWMHPRFS  780
IFSKHNSVRD VLMEERGAIS THCDVDAYHV FAPSPQERNN TQGLQLRVDV ASPQNEVDE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-104	FAR1 family protein