PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027166135.1

Organism

Coffea eugenioides

Taxonomic ID

49369

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

FAR1

Protein Properties

Length: 542aa MW: 62630.1 Da PI: 7.3554

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027166135.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	34.1	8.7e-11	63	105	48	90
FAR1 48 tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 ++k+ +r +tr gCka + v++++++kw +++l+leHnH la XP_027166135.1 63 HNKADMPRDKTRKGCKALVYVSQKEEDKWIIARLVLEHNHVLA 105 45666789********************************996 PP

Sequence ? help Back to Top
Protein Sequence Length: 542 aa Download sequence
MERELGTECP MEQDQVDHDA AHGSMPEDST NEQIEPRKEV NLYVGMEFES LGDAFKCYSN 60 YAHNKADMPR DKTRKGCKAL VYVSQKEEDK WIIARLVLEH NHVLASPYSK KFLRLKRKKS 120 EAQKNLIDML DQSGVRPSKI VSVLATQVGG IGNLNFTDHD VCNYLSTKRH KELEKGDAQL 180 MLQYFQKRQF ENPGFFYAIQ VDIEGRLANC FWTDAKSRSL YKHFGDVVTF DPTYLTNKYK 240 MPFVPLTRVN HHYQSILFGG ALVWDETEES FVWLLQTWLE AMFGCPPKTV ITDQDTAITN 300 AVARVLPHST HHFCMWHIEK KFPETLSHIY HQNNDFKYHF SKCIHDTITP EEFEMAWTEL 360 IEKYKLQNNT WIQKVYSIRE RWVPAFVRAS FCVVHYLLDR WTMSAICGRD EGDFSEKLHQ 420 AEPLTNSSMW FNDIMVRSLG ISEKASRSAK HHRVALQGLQ ALSDKLDDLP YENEQDSSLS 480 ISQVDSHSEI HDLTQGQTSQ KSITLFNPVT VASKGRPRTL RMKGGLEKSR KSNKCSCCKE 540 KG

Sequence ? help Back to Top

Protein Sequence Length: 542 aa Download sequence

MERELGTECP MEQDQVDHDA AHGSMPEDST NEQIEPRKEV NLYVGMEFES LGDAFKCYSN  60
YAHNKADMPR DKTRKGCKAL VYVSQKEEDK WIIARLVLEH NHVLASPYSK KFLRLKRKKS  120
EAQKNLIDML DQSGVRPSKI VSVLATQVGG IGNLNFTDHD VCNYLSTKRH KELEKGDAQL  180
MLQYFQKRQF ENPGFFYAIQ VDIEGRLANC FWTDAKSRSL YKHFGDVVTF DPTYLTNKYK  240
MPFVPLTRVN HHYQSILFGG ALVWDETEES FVWLLQTWLE AMFGCPPKTV ITDQDTAITN  300
AVARVLPHST HHFCMWHIEK KFPETLSHIY HQNNDFKYHF SKCIHDTITP EEFEMAWTEL  360
IEKYKLQNNT WIQKVYSIRE RWVPAFVRAS FCVVHYLLDR WTMSAICGRD EGDFSEKLHQ  420
AEPLTNSSMW FNDIMVRSLG ISEKASRSAK HHRVALQGLQ ALSDKLDDLP YENEQDSSLS  480
ISQVDSHSEI HDLTQGQTSQ KSITLFNPVT VASKGRPRTL RMKGGLEKSR KSNKCSCCKE  540
KG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	3e-92	FAR1 family protein