PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027165931.1

Organism

Coffea eugenioides

Taxonomic ID

49369

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

FAR1

Protein Properties

Length: 839aa MW: 96451 Da PI: 8.043

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027165931.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	74	3.1e-23	26	113	1	89
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHel 89 +fYn+YA ++GFsvrk++ +k ++g +t+r++ C keg +++ + + + +rtra t+tgC ak+++ + + + k++v++++leHnHel XP_027165931.1 26 QFYNKYAFKMGFSVRKDYLNKD-KDGVTTSRRYSCCKEGVKRKYEGD-VMPKRTRAPTKTGCGAKMVIVLFRgTMKYRVHDIVLEHNHEL 113 6***************9998.8999************9999.999***************999**************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 839 aa Download sequence
MDCSKLAEDG TPELGMEFNS EEDAYQFYNK YAFKMGFSVR KDYLNKDKDG VTTSRRYSCC 60 KEGVKRKYEG DVMPKRTRAP TKTGCGAKMV IVLFRGTMKY RVHDIVLEHN HELHIVQCAH 120 MMPSQRKVSE AQGFQAEISE DAGLSLKQSH ELMGKEAGGM GNVGYTREDL KRYLRTRRER 180 SLKYGEAGSM LNYFQEQTLE NPSFFHAVQL DCEEQITNIF WADAGMLIDY KFFGDVVTFD 240 TTYKTNKEYR PLGVFVGFNQ HRQIVIFGAA LMYDETIDSF KWVFGTFLEA MCGKRPSTIL 300 TDQDHAMAAA LSVVMPETFH GLCTFHIRRN FMKHLGNHYK ENSDLPYMFG ACMYEFEEVE 360 QFNRVWEAMV KKHNLENNEW LSGLYKIRDK WARCMMKERW TAGMRSTQLS ESLNAAIKNH 420 LKLDHDLVQF FRHFNRVVDE KRHNELIAEY EMRQKLPMVG LRQTPMLVHA SETYSPTVFV 480 AFQNEYGEST AMVILRQQDA AMIVEFAVMR YDGGPERIVV FNRNDLSVRC SCKKYENEGI 540 LCGHALKVFD TVGIKIIPPE YIKRRWTKRA RAGDCFDRRR REVVADPKIM ISTRYRELAP 600 AMIKVATRAA MSEDTSKVAI TVISDLAKRV ELLLSESEEQ PLQNQKNLNM EERDKIEIVN 660 EMGEAVVARG IKKRGGGKKS RVMRSWIDKF DRVKRKSRLS RTTQTTASES EPTSVSIEEY 720 MFMGCRSSTD SVSTHSMSQT VNGPPNAIAP NIDESETGHR LANQGPPRSV PTEWMHPRFS 780 IFSKYNSVRD VLMEERAALL THCDVDAYHV FAPSPQGRNN TQGLQLRADV AAPENEIDE

Sequence ? help Back to Top

Protein Sequence Length: 839 aa Download sequence

MDCSKLAEDG TPELGMEFNS EEDAYQFYNK YAFKMGFSVR KDYLNKDKDG VTTSRRYSCC  60
KEGVKRKYEG DVMPKRTRAP TKTGCGAKMV IVLFRGTMKY RVHDIVLEHN HELHIVQCAH  120
MMPSQRKVSE AQGFQAEISE DAGLSLKQSH ELMGKEAGGM GNVGYTREDL KRYLRTRRER  180
SLKYGEAGSM LNYFQEQTLE NPSFFHAVQL DCEEQITNIF WADAGMLIDY KFFGDVVTFD  240
TTYKTNKEYR PLGVFVGFNQ HRQIVIFGAA LMYDETIDSF KWVFGTFLEA MCGKRPSTIL  300
TDQDHAMAAA LSVVMPETFH GLCTFHIRRN FMKHLGNHYK ENSDLPYMFG ACMYEFEEVE  360
QFNRVWEAMV KKHNLENNEW LSGLYKIRDK WARCMMKERW TAGMRSTQLS ESLNAAIKNH  420
LKLDHDLVQF FRHFNRVVDE KRHNELIAEY EMRQKLPMVG LRQTPMLVHA SETYSPTVFV  480
AFQNEYGEST AMVILRQQDA AMIVEFAVMR YDGGPERIVV FNRNDLSVRC SCKKYENEGI  540
LCGHALKVFD TVGIKIIPPE YIKRRWTKRA RAGDCFDRRR REVVADPKIM ISTRYRELAP  600
AMIKVATRAA MSEDTSKVAI TVISDLAKRV ELLLSESEEQ PLQNQKNLNM EERDKIEIVN  660
EMGEAVVARG IKKRGGGKKS RVMRSWIDKF DRVKRKSRLS RTTQTTASES EPTSVSIEEY  720
MFMGCRSSTD SVSTHSMSQT VNGPPNAIAP NIDESETGHR LANQGPPRSV PTEWMHPRFS  780
IFSKYNSVRD VLMEERAALL THCDVDAYHV FAPSPQGRNN TQGLQLRADV AAPENEIDE

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	563	581	KRRWTKRARAGDCFDRRRR
2	577	582	DRRRRE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-110	FAR1 family protein