PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027165815.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | bHLH | ||||||||
Protein Properties | Length: 247aa MW: 28304.3 Da PI: 8.4704 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 30.5 | 6.4e-10 | 90 | 138 | 2 | 55 |
HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 r+h ++Er RR + +++f eL ++lP +K +K +i+++A e I++Lq XP_027165815.1 90 NRKHVINERMRRGKQKKSFVELHKMLPYG-----TKGDKNSIVQMAAERIHELQ 138 578************************97.....799999*************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 247 aa Download sequence |
MEEYFFQHYS QGDEVLWFDG EVLPLPAVDD QYHGSSFVKY SNHPLQGFGS NGTVNHGKND 60 RNANKRMIEL LKKRWKPPTI GAVEAERERN RKHVINERMR RGKQKKSFVE LHKMLPYGTK 120 GDKNSIVQMA AERIHELQRC NEELKRRKIE LELALAAAIH DDEENLEVAK IKLRVVHPSS 180 GIDSMLEVLK CLKNTGTKTK GIQSTFSSQE FSAVLEIEAK GAAEVEKAVH ETLFEAEKKF 240 RCPVLFD |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 89 | 101 | RNRKHVINERMRR |
2 | 99 | 106 | MRRGKQKK |
3 | 145 | 172 | KRRKIELELALAAAIHDDEENLEVAKIK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G43650.1 | 7e-32 | bHLH family protein |