PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_027163737.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
|
||||||||
Family | TALE | ||||||||
Protein Properties | Length: 324aa MW: 36237.6 Da PI: 4.8235 | ||||||||
Description | TALE family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 28 | 3.7e-09 | 253 | 285 | 23 | 55 |
SS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHH CS Homeobox 23 rypsaeereeLAkklgLterqVkvWFqNrRake 55 +yp++ee+ +L++ +gL+++q+ +WF N+R ++ XP_027163737.1 253 PYPTEEEKNKLSEVTGLDQKQINNWFINQRKRH 285 8*****************************885 PP | |||||||
2 | ELK | 38.8 | 2e-13 | 205 | 226 | 1 | 22 |
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 ELK++L+rKYsgyL+sL++EF+ XP_027163737.1 205 ELKEMLMRKYSGYLSSLRKEFL 226 9********************8 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 324 aa Download sequence |
MDELYRIHTS FSCPDGGAVE VGSMRGLDRS SPVENLVQFR PGENSHDEVI GSEMSDLLKI 60 QIASHHLYPN LVSAYVECRK VGAPPEMASL LEEISKISRP ISSPSGISAD PELDQFMESY 120 CEALHRYKEE LLKPFDEATT FLSNIELELN NLCKENFTTT TSSSMTSTNY HSDEAGVTSD 180 EDLSCGEVEV AESQESSAAG QGESELKEML MRKYSGYLSS LRKEFLKKRK KGKLPKDARI 240 ALLDWWNTHY RWPYPTEEEK NKLSEVTGLD QKQINNWFIN QRKRHWKPSE DMRFALMQGV 300 SAGTPSPGGP ICFDTAGGNG GFGI |
Nucleic Localization Signal ? help Back to Top | |||
---|---|---|---|
No. | Start | End | Sequence |
1 | 221 | 230 | LRKEFLKKRK |
2 | 227 | 231 | KKRKK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G23380.1 | 1e-65 | TALE family protein |