PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027163718.1

Organism

Coffea eugenioides

Taxonomic ID

49369

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

bZIP

Protein Properties

Length: 372aa MW: 39130.8 Da PI: 7.7657

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027163718.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	46.9	6e-15	269	325	4	59
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH.HHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL.kkeleelkkevakl 59 +++rr++kNRe+A rsR+RK+a++ eLe v +Le+eN +L k+e+++ kk ++l XP_027163718.1 269 QQKQRRMIKNRESAARSRERKQAYTVELESLVTQLEEENARLlKEEADQKKKRFKQL 325 689************************************996266788888777776 PP

Sequence ? help Back to Top
Protein Sequence Length: 372 aa Download sequence
MASSKVMSST SPANPDLPRH STSTATTSST CSTSTTGLLQ HSSAVFHPPP PHQQPQAHHH 60 LLHHSDDHSF GSMNMEEILK NIYSDPDTLA SAVDGDGSLP AVGAGRNNNV GEVGSKTVDE 120 VWKEIVSGGG AAAGGGGGSH EPRMTLEDFL TKAGAVSEED VRVPGVSSPA PPPVPAPAVG 180 GGGGGGYGME VIMNAAASGV QFPPVVHMQN APGGFGMESQ LGFGNRMVPA GAAGQIRGGA 240 GGTGGGSGSG RGKRRAPAVE DVALDKATQQ KQRRMIKNRE SAARSRERKQ AYTVELESLV 300 TQLEEENARL LKEEADQKKK RFKQLMENLI PVVEQQRPPR VLRRVQSMSW ISKEEAFWCG 360 RNCLMGAFAD TK

Sequence ? help Back to Top

Protein Sequence Length: 372 aa Download sequence

MASSKVMSST SPANPDLPRH STSTATTSST CSTSTTGLLQ HSSAVFHPPP PHQQPQAHHH  60
LLHHSDDHSF GSMNMEEILK NIYSDPDTLA SAVDGDGSLP AVGAGRNNNV GEVGSKTVDE  120
VWKEIVSGGG AAAGGGGGSH EPRMTLEDFL TKAGAVSEED VRVPGVSSPA PPPVPAPAVG  180
GGGGGGYGME VIMNAAASGV QFPPVVHMQN APGGFGMESQ LGFGNRMVPA GAAGQIRGGA  240
GGTGGGSGSG RGKRRAPAVE DVALDKATQQ KQRRMIKNRE SAARSRERKQ AYTVELESLV  300
TQLEEENARL LKEEADQKKK RFKQLMENLI PVVEQQRPPR VLRRVQSMSW ISKEEAFWCG  360
RNCLMGAFAD TK

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	317	324	QKKKRFKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G03970.1	5e-23	bZIP family protein