PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027163667.1

Organism

Coffea eugenioides

Taxonomic ID

49369

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

bHLH

Protein Properties

Length: 332aa MW: 36480.4 Da PI: 5.8475

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027163667.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	43.5	5.5e-14	156	201	5	55
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 h ++Er+RR+++ ++f L ++P + kK++K++iL A+eY+k+Lq XP_027163667.1 156 HIIAERKRREQLSQRFMALSAIVPGL-----KKMDKSSILGDAIEYLKHLQ 201 899*********************.....9****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 332 aa Download sequence
MDFLNDELSA ALADDFQNSS FPEGNPSFSN IFPSCNSTPA LCEPSVMEAH PVGFETPAKQ 60 HKTNNGYDSS NIHNMPNFGQ ASSSPMILTF GNPNMPEINP HQVTLGTLNP EDDAVSEVLT 120 SHGSFAKLDE AAKTTVQTKA KKPGGRVRPP SQTYDHIIAE RKRREQLSQR FMALSAIVPG 180 LKKMDKSSIL GDAIEYLKHL QERVKTLEEK AARQTMESVV LVKRSQLLLE DEGSSDEVAG 240 PNEQPLPEFE AKVCDKNVLL RIHCKNYKGV LIKILSQIDK LNLAVVNTCV SPFGNFALDI 300 TIIAEAEKEV NLTTKELVDT LRSVLQQGKH AA

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	160	165	ERKRRE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37850.1	2e-53	bHLH family protein