PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027163572.1

Organism

Coffea eugenioides

Taxonomic ID

49369

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

NAC

Protein Properties

Length: 473aa MW: 52777 Da PI: 6.9612

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027163572.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	167.7	3.9e-52	11	139	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvka...eekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 +ppGfrFhPt+eel+++yL+kkv+ +k++l +vi++vd++k+ePwd++ k+k +++wyfFs++dkky+tg+r+nrat++g+Wkatg+dk + XP_027163572.1 11 VPPGFRFHPTEEELLQYYLRKKVAYEKIDL-DVIRDVDLNKLEPWDIQDKCKIgstPQNDWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKVI 104 69**************************.9***********954444122455******************************** PP NAM 93 lskkgelvglkktLvfykgrapkgektdWvmheyrl 128 +s +++ +g++ktLvfykgrap+g+k+dW+mheyrl XP_027163572.1 105 YS-NSRRIGMRKTLVFYKGRAPHGQKSDWIMHEYRL 139 .9999***************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 473 aa Download sequence
MRISVNGQSQ VPPGFRFHPT EEELLQYYLR KKVAYEKIDL DVIRDVDLNK LEPWDIQDKC 60 KIGSTPQNDW YFFSHKDKKY PTGTRTNRAT AAGFWKATGR DKVIYSNSRR IGMRKTLVFY 120 KGRAPHGQKS DWIMHEYRLD DNSTSNNAAE VCNAAAEAAA QEEGGWVVCR IFKKKNHHII 180 KSLDHATPFV TTCSIVTTAE CTRGPRQRLI GSSDDDDDER SLEKILEYMG RTCAEERGRD 240 QANQSATPMF PMVPVDIVTK STGQLCDRFM KLPGLESPKS SPRTTTTCTH ACYQPITSLQ 300 VLPGRGGDDA DDVPHDPCIA LMSQVNVVNA ADHLHSVNTT STNYRPSETA AGLSDWAALD 360 RLVATHLNGQ NETAKHLSSC FDGGDHPADP RAVAAPCCGP PVPDQDLQLH YQLIRSLSSS 420 ASSSDVINNH HNHSCNNNKS RDYHHDECEL WSFVRSALAP TDPPFSHMPN VRV

Sequence ? help Back to Top

Protein Sequence Length: 473 aa Download sequence

MRISVNGQSQ VPPGFRFHPT EEELLQYYLR KKVAYEKIDL DVIRDVDLNK LEPWDIQDKC  60
KIGSTPQNDW YFFSHKDKKY PTGTRTNRAT AAGFWKATGR DKVIYSNSRR IGMRKTLVFY  120
KGRAPHGQKS DWIMHEYRLD DNSTSNNAAE VCNAAAEAAA QEEGGWVVCR IFKKKNHHII  180
KSLDHATPFV TTCSIVTTAE CTRGPRQRLI GSSDDDDDER SLEKILEYMG RTCAEERGRD  240
QANQSATPMF PMVPVDIVTK STGQLCDRFM KLPGLESPKS SPRTTTTCTH ACYQPITSLQ  300
VLPGRGGDDA DDVPHDPCIA LMSQVNVVNA ADHLHSVNTT STNYRPSETA AGLSDWAALD  360
RLVATHLNGQ NETAKHLSSC FDGGDHPADP RAVAAPCCGP PVPDQDLQLH YQLIRSLSSS  420
ASSSDVINNH HNHSCNNNKS RDYHHDECEL WSFVRSALAP TDPPFSHMPN VRV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G46770.1	1e-101	NAC family protein