PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027163416.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | G2-like | ||||||||
Protein Properties | Length: 386aa MW: 43199.4 Da PI: 8.6483 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 101.1 | 7.3e-32 | 77 | 130 | 2 | 55 |
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 prlrWtpeLH +F++ave+LGG+++AtPk +l+lm++kgL+++hvkSHLQ+YR+ XP_027163416.1 77 PRLRWTPELHLCFIHAVERLGGQDRATPKLVLQLMNIKGLSIAHVKSHLQMYRS 130 8****************************************************7 PP | |||||||
2 | Myb_DNA-binding | 52.5 | 1.2e-16 | 78 | 129 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT+e+++ +++av++lGg t+k++ + m+ kg++ ++ks++q+y+ XP_027163416.1 78 RLRWTPELHLCFIHAVERLGGQdraTPKLVLQLMNiKGLSIAHVKSHLQMYR 129 89************************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 386 aa Download sequence |
MKESSCSTED SKTSPTTNQR LEDDEEDHED DDHQEDMNNN STKPNINGTS SSSSTVEENS 60 KKPASGSVRQ YIRSKTPRLR WTPELHLCFI HAVERLGGQD RATPKLVLQL MNIKGLSIAH 120 VKSHLQMYRS KKIDDPNQVI SEQRLLADSG DHNIYNLSKL PMLQAFDHFS SSGSLRYGNT 180 FWNSRQTNYH GPYNYGGAPS NFTRHGFGTA DKFFGRNNVG HLYGSHEFNA ARQSSWRNIL 240 ANENETQFFS SQGPWRTQSG TGTSSNVKPS LMSQLHDRGR SEQINADFRG PLSPGKKPHA 300 VQEGINLLKR KASADSDVNL DLNLSLPTPR QTDDRDNRRL KVDGTDNSLS LSLFPSSTSV 360 SSRNLEEIHG NTRKHARTAS TLDLTL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G38300.1 | 5e-47 | G2-like family protein |