PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027163130.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | bHLH | ||||||||
Protein Properties | Length: 624aa MW: 66255.2 Da PI: 6.5959 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 50.2 | 4.6e-16 | 353 | 399 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 hn ErrRRdriN+++ L+el+P++ K +Ka++L +A+eY+k Lq XP_027163130.1 353 VHNLSERRRRDRINEKMRALQELIPNC-----NKADKASMLDEAIEYLKTLQ 399 6*************************8.....6******************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 624 aa Download sequence |
MPSVRSGETY LNQEDEMGPW LNYPVDDGFR SDFCSEILPE ISGVTGNETS ALNSFGSVVK 60 GSCNQMPQHS YAVPVHNVLD IEARNASKVS SSRTGLLSPY SSQQCQLSVA PAGSGVSSVV 120 MNTTSNNPVT FFGDTFQGQA SPGGLVSMKM QNQKVGASNF LNFTHFSRPA ALVRANLEKT 180 DGIAASCSSG IEKVSAVSSS SPVKSTHKPS SNSQKDICVH NQPKLVSTKV DSRPSVDKPP 240 EESCSAQRPD NLHWDDSIKN DKSSSPIIGS SITKEVKDSE NPVEPVVAAS SVCSANSGEG 300 ASNDQMHTLK RKHCDNEESE SRSEEIDEES VGIKKVAHAR GVSGSKRSRA AEVHNLSERR 360 RRDRINEKMR ALQELIPNCN KADKASMLDE AIEYLKTLQL QVQVMSMGAG LCMPPMMFPT 420 GLQHMHAAHV PHFPPMAGGM GMGMGYGMGM LDLNSGSPRF PIFPLPPMQG AHFPSPTISG 480 SSGFQGLAGS NLQVFGHPGQ GVPMSIPRAP LVPLVGQAPI SSAVGVDTSR MGIHVEASNA 540 SPTLNSVVEV QNKNSQLNHK TDTGSSISQT SSQLQATNKE FDQSAMTSKD DQAPDVCAAA 600 SVNMASTTDL VCDKEKGSNG MCKG |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 358 | 363 | ERRRRD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G09530.2 | 3e-40 | bHLH family protein |