PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027163129.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | bHLH | ||||||||
Protein Properties | Length: 718aa MW: 76553.8 Da PI: 6.5092 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 50 | 5.5e-16 | 449 | 495 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 hn ErrRRdriN+++ L+el+P++ K +Ka++L +A+eY+k Lq XP_027163129.1 449 VHNLSERRRRDRINEKMRALQELIPNC-----NKADKASMLDEAIEYLKTLQ 495 6*************************8.....6******************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 718 aa Download sequence |
MPLSEFLRMA RGKLESAQPK TASPTDLSPA TENDLVELLW ENGQILMQGQ SNRVKKSPNL 60 NDFPSQEPGI RDRFTGNVST PKVGKFIEIG STLNDAMPSV RSGETYLNQE DEMGPWLNYP 120 VDDGFRSDFC SEILPEISGV TGNETSALNS FGSVVKGSCN QMPQHSYAVP VHNVLDIEAR 180 NASKVSSSRT GLLSPYSSQQ CQLSVAPAGS GVSSVVMNTT SNNPVTFFGD TFQGQASPGG 240 LVSMKMQNQK VGASNFLNFT HFSRPAALVR ANLEKTDGIA ASCSSGIEKV SAVSSSSPVK 300 STHKPSSNSQ KDICVHNQPK LVSTKVDSRP SVDKPPEESC SAQRPDNLHW DDSIKNDKSS 360 SPIIGSSITK EVKDSENPVE PVVAASSVCS ANSGEGASND QMHTLKRKHC DNEESESRSE 420 EIDEESVGIK KVAHARGVSG SKRSRAAEVH NLSERRRRDR INEKMRALQE LIPNCNKADK 480 ASMLDEAIEY LKTLQLQVQV MSMGAGLCMP PMMFPTGLQH MHAAHVPHFP PMAGGMGMGM 540 GYGMGMLDLN SGSPRFPIFP LPPMQGAHFP SPTISGSSGF QGLAGSNLQV FGHPGQGVPM 600 SIPRAPLVPL VGQAPISSAV GVDTSRMGIH VEASNASPTL NSVVEVQNKN SQLNHKTDTG 660 SSISQTSSQA TNKEFDQSAM TSKDDQAPDV CAAASVNMAS TTDLVCDKEK GSNGMCKG |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 454 | 459 | ERRRRD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G09530.2 | 1e-39 | bHLH family protein |