PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027162827.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | bHLH | ||||||||
Protein Properties | Length: 174aa MW: 19645.3 Da PI: 8.6898 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 36.3 | 1e-11 | 12 | 59 | 5 | 55 |
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 + +Er+RR+r+++ +++L +l+P++ + + s + Le+A++YIk++q XP_027162827.1 12 RKTIERNRRNRMKTLYSKLTSLIPPQ---SREASSLPDQLEEATNYIKKMQ 59 678**********************9...8888****************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 174 aa Download sequence |
MEPNPSSSKA DRKTIERNRR NRMKTLYSKL TSLIPPQSRE ASSLPDQLEE ATNYIKKMQI 60 KLEKLKERRD FTNGTRLSSD TDTASAGLRL PHIDIQERGS ALEVVLITKS DCQFMFTETI 120 RLLHEEGAEV VNASFSVLDE TIFHTVHSKI GESAPCSAAA RISEKLKKYV YGDN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G20970.1 | 5e-42 | bHLH family protein |