PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027162525.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | MYB | ||||||||
Protein Properties | Length: 277aa MW: 31736.4 Da PI: 7.5049 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 50.7 | 4.1e-16 | 9 | 56 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd ll ++ +++G g W+ ++ + g++R++k+c++rw++yl XP_027162525.1 9 KGAWTEEEDILLRKCMEKYGEGKWHQVPLRAGLNRCRKSCRLRWLNYL 56 79********************************************97 PP | |||||||
2 | Myb_DNA-binding | 44.3 | 4.2e-14 | 62 | 107 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg + +E +ll+++ k+lG++ W++Ia +++ gRt++++k++w+++l XP_027162525.1 62 RGDFASDEVDLLIRLQKLLGNR-WSLIAGRLP-GRTANDVKNYWNTHL 107 6778889***************.*********.************996 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 277 aa Download sequence |
MRNTDGLRKG AWTEEEDILL RKCMEKYGEG KWHQVPLRAG LNRCRKSCRL RWLNYLRPDI 60 KRGDFASDEV DLLIRLQKLL GNRWSLIAGR LPGRTANDVK NYWNTHLIKK MAFRRQPDEK 120 GQAGNTNYTT KPRASNIVKP RPWTFSKNAS WLRGKATTTT TTTASSSTEI PTIRTTTNAQ 180 GLKDSPPTSH PTIEKDDDNN MQWWDNLFLD EEGGEGTPLG FDASGEDNVT SLWFEELSQM 240 VFKEGDIWTQ ENQNGSGYSS TDADLWDFQI SDHQTMQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G66370.1 | 9e-68 | MYB family protein |