PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027161616.1

Organism

Coffea eugenioides

Taxonomic ID

49369

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

FAR1

Protein Properties

Length: 847aa MW: 96359.9 Da PI: 6.9896

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027161616.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	52.8	1.3e-16	68	141	1	88
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHe 88 +fY++YA++vGFs+ + + ++sk +g i++ +f C +e +++++ ++ C+a+l+++k++++ w vtk++++HnH+ XP_027161616.1 68 SFYDAYARHVGFSTHVGQYSRSKPDGPIVRWDFACCREVFKRKNVET--------------CNAMLRIEKKNSDSWIVTKFVEDHNHS 141 5**************************************999888..............************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 847 aa Download sequence
MDDEVVEVVH VDREKRQKNG ESHTHINHDR KKNLPGNSAE NERSCQVENG IEKPYVGMEF 60 ESEEAAKSFY DAYARHVGFS THVGQYSRSK PDGPIVRWDF ACCREVFKRK NVETCNAMLR 120 IEKKNSDSWI VTKFVEDHNH STVNPGKVHY LRPRRHFAGA TTSAAETLSS QNDLMISTNG 180 NNVYYELTHR ASCVSPVEIS VPVRNLSPLM PINFVQPCGQ KRTLGRDAHN LLNYFKKMQA 240 ENPGFYYAIQ LDDDNCMTNI FWADARSRTA YSHFGDAVIF DTMYRPNQFQ VPFAPFTGVN 300 HHGQMVLFGC ALILDESESS FAWVFRTWLS AMNNHPPVSM TTDQDRAIKA AVHQVLPETR 360 HCICKWHILR EGQERLAHVY LAHPSFYGEL YSCINFSETI EDFESSWSSL LDKYNLWKNE 420 WLKAVYNARQ QWAPVYFRDC FFAAFSANHG ISSFFDGYVN QQTNLPTFFK QYERALENSL 480 EREIEADFDT LCSTPELKTP SPMEQQAASL YTKKIFAKFQ EELVETFVYT ANKIDGDGVI 540 SKFRVAKYEH DDKAYIVTLD ISDVKADCSC QMFEYSGIVC RHILTVFTVT NVLKLPARYI 600 LKRWTRTARL GSDDRGADTQ SMESLTSRFN NLCREALKYA EEGAISSETY CTALGALREG 660 ARKIAVVKKN VAKVRPPSSQ GSGHFQDEIN KKTPLPTSDA CPPLRPWSDM LPHCLNLNDV 720 GVPLADSNQP STGPVTINRE GSPSDSPVVL TCFKSMTWVI ENTDPANKVA VINLKLQDYG 780 KTPSGETDVQ FRLTKVTLEP MLKSMTYISQ QLSAPANRVA VINLKETVLK TEYLISRQML 840 CHRESWL

Sequence ? help Back to Top

Protein Sequence Length: 847 aa Download sequence

MDDEVVEVVH VDREKRQKNG ESHTHINHDR KKNLPGNSAE NERSCQVENG IEKPYVGMEF  60
ESEEAAKSFY DAYARHVGFS THVGQYSRSK PDGPIVRWDF ACCREVFKRK NVETCNAMLR  120
IEKKNSDSWI VTKFVEDHNH STVNPGKVHY LRPRRHFAGA TTSAAETLSS QNDLMISTNG  180
NNVYYELTHR ASCVSPVEIS VPVRNLSPLM PINFVQPCGQ KRTLGRDAHN LLNYFKKMQA  240
ENPGFYYAIQ LDDDNCMTNI FWADARSRTA YSHFGDAVIF DTMYRPNQFQ VPFAPFTGVN  300
HHGQMVLFGC ALILDESESS FAWVFRTWLS AMNNHPPVSM TTDQDRAIKA AVHQVLPETR  360
HCICKWHILR EGQERLAHVY LAHPSFYGEL YSCINFSETI EDFESSWSSL LDKYNLWKNE  420
WLKAVYNARQ QWAPVYFRDC FFAAFSANHG ISSFFDGYVN QQTNLPTFFK QYERALENSL  480
EREIEADFDT LCSTPELKTP SPMEQQAASL YTKKIFAKFQ EELVETFVYT ANKIDGDGVI  540
SKFRVAKYEH DDKAYIVTLD ISDVKADCSC QMFEYSGIVC RHILTVFTVT NVLKLPARYI  600
LKRWTRTARL GSDDRGADTQ SMESLTSRFN NLCREALKYA EEGAISSETY CTALGALREG  660
ARKIAVVKKN VAKVRPPSSQ GSGHFQDEIN KKTPLPTSDA CPPLRPWSDM LPHCLNLNDV  720
GVPLADSNQP STGPVTINRE GSPSDSPVVL TCFKSMTWVI ENTDPANKVA VINLKLQDYG  780
KTPSGETDVQ FRLTKVTLEP MLKSMTYISQ QLSAPANRVA VINLKETVLK TEYLISRQML  840
CHRESWL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G27110.2	0.0	FAR1 family protein