PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_027161096.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
|
||||||||
Family | FAR1 | ||||||||
Protein Properties | Length: 923aa MW: 106219 Da PI: 6.9768 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 61.6 | 2.3e-19 | 79 | 168 | 2 | 90 |
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 fY YA+ +GF +r+s k+ ++g++ r++ C +eg+ree+ k+ +++ r+ +++tr++Cka++++k + ++k+ vt++ eHnH+la XP_027161096.1 79 FYFVYARAMGFGIRRSDRKYY-DDGKTRYRKWLCCREGEREERWKTmENRMREAKVVTRVKCKACFRIKYDLpSSKFIVTEFLREHNHTLA 168 9**************998877.78889999999**********9996677788999***************99****************97 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 923 aa Download sequence |
MNWHEPSCLE HANEELEREQ LTGSREQNGE RGEMRAEAGE GVMQEEVMAN NVQARCIDDL 60 EYDQVMNMTF DSVEDAELFY FVYARAMGFG IRRSDRKYYD DGKTRYRKWL CCREGEREER 120 WKTMENRMRE AKVVTRVKCK ACFRIKYDLP SSKFIVTEFL REHNHTLATP STAIFLRAHR 180 NVSDADYAHA YALRRVGTRT SQIMKLFALE AGGYDKVNFQ NKDLYNKIER ERKNEIIHGD 240 AEGAIAYLQG KKDLDNDFCY KYHTDSENRL MRLFWADSQS LYDYKCFGEV LVFDSTYKTN 300 DYNQPLVVLC GVNNHFSTCI FACCLVSNED EEAFDWVLQT LVDANGGKKP ISIITDGDPA 360 MKKAIKNIIP EARHRLCSWH LQRNAKYNAN KAFMKRFSSC MHNNWSPQRF EREWEKAVIE 420 CGIQDSEWVK SVYKKRDKWA TAYLRDHFFA GMKSTQRCEK MNDVLKIHLT GELKLFEFMR 480 AFDLGVAAIR HEENRLIAET EQTSLLPTTD MPWIEEHAAE IYTRNIFLMV RNAIKGQGMY 540 NRSDLIDDGV HKIHFVEHSR ENGRFRVQQT ILGGMLACSC MMFETLGLPC THMFRIMLLE 600 GIERIPDFLI MKRWTRKARE EFHRGATVVQ NVADDVTELA RYGRLMAGCK PMCLYASKTD 660 VGYERILSII ERETPEVRKL SENRRPAEPT LRQPQRNYGV KDPERARSKG SQRQEPRRRS 720 TGIQCGKCGK RDGHNKRTCP LNTSNLDDNC SYEETDELGS DEQFDEVHYQ RAAFGGSSSS 780 KQTSFNDISR LQACGGVVHT TDYNQSLMGS WSMQLSTHMS TSTDGGRMNV EMQPMTCDFS 840 SETPTFCDAG SHSLIPRFSS KASSSTGIPY AWSSDSGYDF EGTSNDTYGV YGSITTAREC 900 VVKAGADKVF TVFTVVMHGV DML |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT4G38180.1 | 1e-89 | FAR1 family protein |