PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027160006.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | BBR-BPC | ||||||||
Protein Properties | Length: 312aa MW: 34923.2 Da PI: 10.1221 | ||||||||
Description | BBR-BPC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GAGA_bind | 331.7 | 2e-101 | 1 | 312 | 1 | 301 |
GAGA_bind 1 mdddgsre..rnkg.yye...............paaslkenlglqlmssiaerdakirernlalsekkaavaerdmaflqrdkalaernkalver 77 mdd g+re r+++ yy+ +++++ +++++ ++aerda+i+er+ alsek+aa+ erd a +qrd+a++er++al er XP_027160006.1 1 MDDGGQREsrRQRTdYYKgahspwngiphyqikEQNAFF--MNTKINMLLAERDAAIEERDRALSEKRAALDERDSAIQQRDTAISERDHALRER 93 99****999888889************777653224444..8889999999******************************************** PP GAGA_bind 78 dnkllalllvenslasalpvgvqvlsgtksidslqqlsepqledsavelreeeklealpieeaaeeakekkkkkkrqrakk.pkekkakkkkkks 171 dn+++al+++e +++ a g+++ +g k ++++ + + ++sa ++re +++ea+pi+ +ea ++++ k+++ +++ p ++k+ kk k + XP_027160006.1 94 DNAIAALQFQESTMNGA--LGCGIQHGMKRFNQHRS-PHANSAQSANKTREGHITEAFPITAISSEAARSHQAKRTKVNNViPTKSKSAKKAKVG 185 *********99986655..59999999999997777.78899999999*************9999999888888665544326666666777777 PP GAGA_bind 172 ekskkkvkkesaderskaekksidl.vlngvslDestlPvPvCsCtGalrqCYkWGnGGWqSaCCtttiSvyPLPvstkrrgaRiagrKmSqgaf 265 e+ +++v++++ skae++ +dl +ln++s+De+++P+PvC+CtG+ rqCYkWGnGGWqS+CCtt++SvyPLP+ +++r+aR++grKmS+++f XP_027160006.1 186 EDLNRHVTTDG----SKAEWDAQDLsSLNQISFDETRMPIPVCTCTGVARQCYKWGNGGWQSSCCTTSLSVYPLPQIPNKRHARMGGRKMSGSVF 276 77777777766....89********89******************************************************************** PP GAGA_bind 266 kklLekLaaeGydlsnpvDLkdhWAkHGtnkfvtir 301 ++lL +Laa G+dls ++DLk++WAkHGtn+++ti+ XP_027160006.1 277 SRLLTRLAAGGHDLSIALDLKNYWAKHGTNRYITIK 312 ***********************************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 312 aa Download sequence |
MDDGGQRESR RQRTDYYKGA HSPWNGIPHY QIKEQNAFFM NTKINMLLAE RDAAIEERDR 60 ALSEKRAALD ERDSAIQQRD TAISERDHAL RERDNAIAAL QFQESTMNGA LGCGIQHGMK 120 RFNQHRSPHA NSAQSANKTR EGHITEAFPI TAISSEAARS HQAKRTKVNN VIPTKSKSAK 180 KAKVGEDLNR HVTTDGSKAE WDAQDLSSLN QISFDETRMP IPVCTCTGVA RQCYKWGNGG 240 WQSSCCTTSL SVYPLPQIPN KRHARMGGRK MSGSVFSRLL TRLAAGGHDL SIALDLKNYW 300 AKHGTNRYIT IK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G21240.1 | 1e-120 | BBR-BPC family protein |