PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027158473.1

Organism

Coffea eugenioides

Taxonomic ID

49369

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

FAR1

Protein Properties

Length: 440aa MW: 50365.1 Da PI: 7.0789

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027158473.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	67.3	4e-21	85	175	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 +fYn YAk GF +rks+ k+ ++g r++vC +eg+r+e+ + ++++r+ +a trtgC a+++vk ++ + k++vt++ eHnH+la XP_027158473.1 85 EFYNLYAKLSGFGIRKSNAKRD-EDGISRFRKWVCCCEGYRNEKWFNyEDRKREAKAITRTGCGACFRVKYDTeSVKYVVTRFIMEHNHPLA 175 6**************98887.8898999********9988767889999*************9899************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 440 aa Download sequence
MGQDGVLKTH DMVQETEKGK MGMDGCGRLM SFDLNQEPEC DRDTCSEESG GSIGGHEDEE 60 ADELVGAIGV DDVMKLTFDT EEAGEFYNLY AKLSGFGIRK SNAKRDEDGI SRFRKWVCCC 120 EGYRNEKWFN YEDRKREAKA ITRTGCGACF RVKYDTESVK YVVTRFIMEH NHPLASEASV 180 QHLRSHRKVS DAEYAQAKSL KLVGARICQI MKHFVIKAGG YSNVGFCIKD LYNRMDEERR 240 KDIFNGDAEG ALGFLAAKKD ADDMFFYKYH VDNEGKLARL FWADSKSRVD FSVFGDVLVF 300 DTTYKTNKYR KPLVVLAGVN NHLNSTIFGC ALLSDERIET YEWVLSTFVE AMKGRKPVAV 360 MTDGDSAMRR AIKNLLPDAC HRLCSWHLHR NARSNIRCEE FNNRLYDLMA RKFSTLEFED 420 RWARLVNGQR PIYAVIFLQV

Sequence ? help Back to Top

Protein Sequence Length: 440 aa Download sequence

MGQDGVLKTH DMVQETEKGK MGMDGCGRLM SFDLNQEPEC DRDTCSEESG GSIGGHEDEE  60
ADELVGAIGV DDVMKLTFDT EEAGEFYNLY AKLSGFGIRK SNAKRDEDGI SRFRKWVCCC  120
EGYRNEKWFN YEDRKREAKA ITRTGCGACF RVKYDTESVK YVVTRFIMEH NHPLASEASV  180
QHLRSHRKVS DAEYAQAKSL KLVGARICQI MKHFVIKAGG YSNVGFCIKD LYNRMDEERR  240
KDIFNGDAEG ALGFLAAKKD ADDMFFYKYH VDNEGKLARL FWADSKSRVD FSVFGDVLVF  300
DTTYKTNKYR KPLVVLAGVN NHLNSTIFGC ALLSDERIET YEWVLSTFVE AMKGRKPVAV  360
MTDGDSAMRR AIKNLLPDAC HRLCSWHLHR NARSNIRCEE FNNRLYDLMA RKFSTLEFED  420
RWARLVNGQR PIYAVIFLQV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-61	FAR1 family protein