PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027158455.1

Organism

Coffea eugenioides

Taxonomic ID

49369

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

FAR1

Protein Properties

Length: 839aa MW: 96453.8 Da PI: 7.8297

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027158455.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	72.7	7.9e-23	26	113	1	89
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHel 89 kfYn+YA ++GFsvrk++ +k ++g +t+r++ C keg +++ + + + +rtra +tgC ak+++ + + + k++v++l+leHnHel XP_027158455.1 26 KFYNKYAFKMGFSVRKDYLNKD-KDGVTTSRRYSCCKEGVKRKYEGD-VMPKRTRAPMKTGCGAKMVIVLFRgTMKYRVHDLVLEHNHEL 113 6***************9998.8999************9999.9999**************999**************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 839 aa Download sequence
MDYSKLAENG TPELGMEFNS EEDAYKFYNK YAFKMGFSVR KDYLNKDKDG VTTSRRYSCC 60 KEGVKRKYEG DVMPKRTRAP MKTGCGAKMV IVLFRGTMKY RVHDLVLEHN HELHIAQCAH 120 MMPSQRKVSV AQGFQAEISE DAGLSLKQSH ELMGTEAGGM GNVGYTRDDL KRYLRTRRER 180 SLKYGEAGSM LNYFQEQTLE NPSFFHAVQL DCEEQITNIF WADAGMLIDY NFFGDVVTFD 240 TTYKTNKEYR PLGVFVGFNQ HRQIVIFGAA LMYDETIDSF KWVFGTFLEA MCGKHPSTIL 300 TDQDHAMAAA LSIVMPETFH GLCTFHIRRN FMKHLGNHYK ENSDLPYMFG ACMYEFEEVE 360 QFNRVWEAMV KKHNLENNEW LSGLYKIRDK WARCMMKERW TAGMRSTQLS ESLNAAIKNH 420 LKLDHDLVQF FRHFNRVVDE KRYNELIAEY EMRQKLPMVG LRQTPMLVHA SETYSPTVFV 480 AFQNEYGEST AMVILRQQDA AMFVEFTVMR YDGGPERTVV FNRNDLSVRC SCKKYENEGI 540 LCGHALKVFD TVGIKIIPLE YIKRRWTKRA RAGDCFDRRG QEVVTDPKVM ISTRYRELAP 600 AMIKVATRAA MSEDTSKVAI TVISDLSKRV ELLLSESEEQ PLQNQKNLNM EERDKIEIVN 660 EMGEAVVARG IKKRGCGKKS RVMRSWVDKF DRVKRKSRLS RTTQTTVSES EPTSVSFEEY 720 MFMGCRSSTD SVSTHSMSQT VNGPPNAVAP DIDENQTVHR FANQGPPASV PTEWMHPRFS 780 IFSKHNSVRD VLMEERGAIS THCDVDAYHA FAPSPQGRNN TQGLQLRVDV ASPQNEVDE

Sequence ? help Back to Top

Protein Sequence Length: 839 aa Download sequence

MDYSKLAENG TPELGMEFNS EEDAYKFYNK YAFKMGFSVR KDYLNKDKDG VTTSRRYSCC  60
KEGVKRKYEG DVMPKRTRAP MKTGCGAKMV IVLFRGTMKY RVHDLVLEHN HELHIAQCAH  120
MMPSQRKVSV AQGFQAEISE DAGLSLKQSH ELMGTEAGGM GNVGYTRDDL KRYLRTRRER  180
SLKYGEAGSM LNYFQEQTLE NPSFFHAVQL DCEEQITNIF WADAGMLIDY NFFGDVVTFD  240
TTYKTNKEYR PLGVFVGFNQ HRQIVIFGAA LMYDETIDSF KWVFGTFLEA MCGKHPSTIL  300
TDQDHAMAAA LSIVMPETFH GLCTFHIRRN FMKHLGNHYK ENSDLPYMFG ACMYEFEEVE  360
QFNRVWEAMV KKHNLENNEW LSGLYKIRDK WARCMMKERW TAGMRSTQLS ESLNAAIKNH  420
LKLDHDLVQF FRHFNRVVDE KRYNELIAEY EMRQKLPMVG LRQTPMLVHA SETYSPTVFV  480
AFQNEYGEST AMVILRQQDA AMFVEFTVMR YDGGPERTVV FNRNDLSVRC SCKKYENEGI  540
LCGHALKVFD TVGIKIIPLE YIKRRWTKRA RAGDCFDRRG QEVVTDPKVM ISTRYRELAP  600
AMIKVATRAA MSEDTSKVAI TVISDLSKRV ELLLSESEEQ PLQNQKNLNM EERDKIEIVN  660
EMGEAVVARG IKKRGCGKKS RVMRSWVDKF DRVKRKSRLS RTTQTTVSES EPTSVSFEEY  720
MFMGCRSSTD SVSTHSMSQT VNGPPNAVAP DIDENQTVHR FANQGPPASV PTEWMHPRFS  780
IFSKHNSVRD VLMEERGAIS THCDVDAYHA FAPSPQGRNN TQGLQLRVDV ASPQNEVDE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-105	FAR1 family protein