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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027158418.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | FAR1 | ||||||||
Protein Properties | Length: 592aa MW: 68796.8 Da PI: 7.7616 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 62.8 | 1e-19 | 21 | 108 | 1 | 89 |
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHel 89 +fYn+Y+ vGFsvrk++ +k ++g +t+r+++C ke ++ + + + +k +rtraet++ C+ak+ + +++ + k++v +l+ e nH+l XP_027158418.1 21 NFYNRYGLVVGFSVRKDYLNKD-KDGVVTSRRYTCCKEDFKPRYEGD-VKPKRTRAETKIRCEAKMGIILNReTMKYQVRDLVIEYNHTL 108 6*****************9998.8999*************9999888.9*******************999989**************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 592 aa Download sequence |
MEEALCPKIG MEFQSEDEAY NFYNRYGLVV GFSVRKDYLN KDKDGVVTSR RYTCCKEDFK 60 PRYEGDVKPK RTRAETKIRC EAKMGIILNR ETMKYQVRDL VIEYNHTLHI SECAHMMRSQ 120 RKVSISQGTQ AEIANDTGIS LKQSHELMGK EAGGLGNIGY TRDDLKRYLR TKRERGLKYG 180 EAGAMLRYFE EQKLENPSCF HAEQLDCEEQ ITNIFWADAS MLLDYTYFGD VVTFDTTYKT 240 NKEYRPLGVF VGFNQFRQLV IFGATLLYDE TIESFKWVFG TFVEAVCGRH PKTIFTDQDA 300 AMSAAISAVM PSTYHGLCTF HIRVNFMKHL GNYYKDGSNL PYRFAKCMYK IEDENEFIMA 360 WDAMLKEHKL ETNEWLCGIY ACRKKLAKCF MKGAWTAGMR STQLSESLNA SIKNYLKLDH 420 DLVQFFKHFN RVVDEKRYNE LRVEYHSRQK LPMLGLQQTP VLIQAASIYS PCMFVAFQNE 480 YDESTTMVIL DQKHTTMHVE YSVSHYDGGR ERRVILNPIT KDITCSCNLF EQEGILCSHA 540 LKVYDMVGTK FIPDQYVTKR WTKKEGPEAA SIARVENYHQ IRLSLFPIDI GY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G38180.1 | 3e-98 | FAR1 family protein |