PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027158391.1
Organism
Coffea eugenioides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family FAR1
Protein Properties Length: 351aa    MW: 41754 Da    PI: 9.0793
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027158391.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR133.21.7e-101185176
            FAR1  1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkw 76
                    kfYn+YA ++ F vrk++ +k  ++g +t+r+    keg +++ + + +  +rtra t+tgC+ k+++ + + + k+
  XP_027158391.1 11 KFYNKYAFKMSFCVRKDYLNKD-KDGVTTSRRCSYFKEGVKRKYEGD-VMPKRTRALTKTGCEVKMVIVLLRgTMKY 85
                    6*****************9998.8888999999999*****999999.999****************9877656665 PP
Sequence ? help Back to Top
Protein Sequence    Length: 351 aa     Download sequence    
MEFNSEEDAY KFYNKYAFKM SFCVRKDYLN KDKDGVTTSR RCSYFKEGVK RKYEGDVMPK  60
RTRALTKTGC EVKMVIVLLR GTMKYRSHEL MGKEVGGMGN VGYTRDDFKR YLRTRRKRSL  120
KYGEAVTFDT TYKTNKEYWP LGVFVGFNQH RQIVIFNAAF MYDEMIDSFK WVFGTFLEAM  180
CEKRPRTILT DQNHHIAAAL SLVIPQTFHG LYTFHIKHNF IKHLDNHYKE NSDLPYMFGA  240
CMYEIEEVEQ FNRVWEAMFF RHFNRVIDDK RHNELIAEYE MRQKLPMIGL RQTSMLVHAA  300
ETYSLTVFVT FQNEYGESTA MVILRQQDAG MFVEFTVMRY DGEPERIVVF N
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.13e-30FAR1 family protein