PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027158204.1

Organism

Coffea eugenioides

Taxonomic ID

49369

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

FAR1

Protein Properties

Length: 338aa MW: 39146.5 Da PI: 5.7446

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027158204.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	72.8	7.8e-23	26	113	1	89
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHel 89 kfYn+YA ++GFsvrk++ +k ++g +t+r++ C ke +++ + + +rt+a t+tgC ak+++ + + + k++v++l+leHnHel XP_027158204.1 26 KFYNKYAFKIGFSVRKDYLNKD-KDGVTTSRRYSCCKESVKRKYEGD-MMPKRTQAPTKTGCGAKMVIVLLRgTMKYRVHDLVLEHNHEL 113 6***************9998.8899********99999988.89999***********99998**************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 338 aa Download sequence
MDCNKLAEDR TPELGMEFNS EEDAYKFYNK YAFKIGFSVR KDYLNKDKDG VTTSRRYSCC 60 KESVKRKYEG DMMPKRTQAP TKTGCGAKMV IVLLRGTMKY RVHDLVLEHN HELHIAQCSH 120 MMPSQRKVSE TQGFQAEISE DAGLSLKQSH ELMGKEERSL KYGEAGSMLN YFQEQTLENP 180 SFFHAVQLDC EEQITNIFWD DAGMLIDYNF FGDVVTFDTT YKTNKEYRPL GVFVGFNQHR 240 QIVIFDAALM YDETIDSFKW VFSTFLEAMC GKRPSTKLTD QDHAIVAALS VVLPEIFHGL 300 CTFHIRHNFM KDLGNHYKEN SDLPYMFGAC MYEIEEVE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	2e-52	FAR1 family protein