PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027157901.1
Organism
Coffea eugenioides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family bHLH
Protein Properties Length: 168aa    MW: 19599.6 Da    PI: 10.2157
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027157901.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH331.1e-104597155
                    CHHHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
             HLH  1 rrrahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55
                    +++ h  +Er+RR++    ++ Lr llP  +   +++K s ++ + +A ++I +++
  XP_027157901.1 45 KKAHHRDIERQRRQETARLYASLRNLLPLeC---KQRKHSVSDHVLQAANHIEHME 97
                    6899*************************88...*******************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 168 aa     Download sequence    
MALDTKEIII NTKFNSARKR QRKPLSAIRV DNHDCGKNPN ANQQKKAHHR DIERQRRQET  60
ARLYASLRNL LPLECKQRKH SVSDHVLQAA NHIEHMEKNI KKLEVKKDKL RNLTGGLIHL  120
EVKNVEETKL SCVYTKFNEE FLYTIQSEAN ADVDPICLQE KLTKKIII
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G25400.11e-18bHLH family protein