PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027157808.1
Organism
Coffea eugenioides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family C2H2
Protein Properties Length: 428aa    MW: 48058.9 Da    PI: 7.4967
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027157808.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.60.00021370390223
                     EETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2   2 kCpdCgksFsrksnLkrHirtH 23 
                     +C+ Cgk+F  ++ L+ H++++
  XP_027157808.1 370 PCSQCGKPF-KPEKLHAHMKSC 390
                     5********.**********98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 428 aa     Download sequence    
MESNQVGAEV RRIHVIYFLS RKGRIEQPHL IRVHHLSRNG VHLRDVKRWL GELRGKDMPE  60
SFSWSYKRRY KSGYVWQDLL DEDLITPISD NEYVLKGSEI SSTATIEDSP SEKRYSMHKE  120
EEDSSDRIPS STEENPDDDH HHQETKMDQP TKIFSPEIEE ESPTFGSEQS STLTDDSMKT  180
KDQDQDQEKN SSFQTPKEEM HEESDKSEGS SYYSPLSSKR NKKANNVMSE EKISAAPSSS  240
ASTSSTAQPS FSKSRSYSNA SHLFRNLITC GAVETNDSVM LTISRRNKPP ANANLSSLDK  300
QNHVSNGTKE LLQKGDKLGG SQRIFGTNWN QQGQSSGRKS FDGVRASQKN NSEFNNQKTN  360
AAHKPIYGPP CSQCGKPFKP EKLHAHMKSC RGMKAWAKYS GPAISAAAAD KPAESPQENL  420
VSGYYLTH