PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027157707.1

Organism

Coffea eugenioides

Taxonomic ID

49369

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

FAR1

Protein Properties

Length: 726aa MW: 84181.3 Da PI: 8.1479

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027157707.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	80.7	2.6e-25	70	158	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 +fY++YAk GF +r s+ +k k+++ i +r f+Cs+egkr ++k++ + +r+etr++C a++k++ ++ gk++v ++++eHnHel+ XP_027157707.1 70 NFYQKYAKASGFGTRLSTGHKDKNSDMILDRIFCCSREGKRPKDKRN-MIVKCPRPETRCDCSARMKISCRQAGKYRVVQFVTEHNHELS 158 6****************************************9999.99999*********************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 726 aa Download sequence
MENDLPTHEV QSCRRLDFED VDSQEINNNA LPLCITDGNQ ENQIFVPLAI PDELVPKLGM 60 EFDTEVAARN FYQKYAKASG FGTRLSTGHK DKNSDMILDR IFCCSREGKR PKDKRNMIVK 120 CPRPETRCDC SARMKISCRQ AGKYRVVQFV TEHNHELSTP SKTHLFRSHR HVTMAHEAEI 180 DMARSYGITP KQSIELMSKQ VGGRENLGFI RDDLKNYLRS KRSIPMIQGD TGGVLEYLQR 240 MQLEDPNFFY AIQVDEDDLI TNIFWADAKM RTDFAHFGDV VCFDTTYRKH KDGRPIALFV 300 GVNHHKQTTV FGGALLYDET IGTFEWLFDT FTKAMMGKIP RTILTDQDGR MATALASQWP 360 TTYHRLCIWH IYQNAATHLA DVFKDFQNFA ADFSHCIYDY ENENDFFEGW SKMLKMYGLE 420 DNKWLKKMFD IKEKWALVYG RETFCADMTT TQRSESMNSV IKKYVSYKHD LLEFFEHFQR 480 LLDDRRYDES VADFRGNQST PAMIFPCKIL QHAASIYTHE VYEKLKDELC KGIDCKWEVD 540 GELGNEVIYR VTPYGKTSHH LVTYDSSKNS ISCSCKKFEF AGFLCSHALK ILMTLNIVTI 600 PDAYILKRWT KAAKTGNVCV SSESSQEMES KAKLSFRYKE LSYLYMQLMT KACECDEAYK 660 IAKDGFWKML EQMDASEIDC SKIKGIKVKE RVTYKSSKRP KSALEMATKK RKYKVKEKSS 720 SKRLQV

Sequence ? help Back to Top

Protein Sequence Length: 726 aa Download sequence

MENDLPTHEV QSCRRLDFED VDSQEINNNA LPLCITDGNQ ENQIFVPLAI PDELVPKLGM  60
EFDTEVAARN FYQKYAKASG FGTRLSTGHK DKNSDMILDR IFCCSREGKR PKDKRNMIVK  120
CPRPETRCDC SARMKISCRQ AGKYRVVQFV TEHNHELSTP SKTHLFRSHR HVTMAHEAEI  180
DMARSYGITP KQSIELMSKQ VGGRENLGFI RDDLKNYLRS KRSIPMIQGD TGGVLEYLQR  240
MQLEDPNFFY AIQVDEDDLI TNIFWADAKM RTDFAHFGDV VCFDTTYRKH KDGRPIALFV  300
GVNHHKQTTV FGGALLYDET IGTFEWLFDT FTKAMMGKIP RTILTDQDGR MATALASQWP  360
TTYHRLCIWH IYQNAATHLA DVFKDFQNFA ADFSHCIYDY ENENDFFEGW SKMLKMYGLE  420
DNKWLKKMFD IKEKWALVYG RETFCADMTT TQRSESMNSV IKKYVSYKHD LLEFFEHFQR  480
LLDDRRYDES VADFRGNQST PAMIFPCKIL QHAASIYTHE VYEKLKDELC KGIDCKWEVD  540
GELGNEVIYR VTPYGKTSHH LVTYDSSKNS ISCSCKKFEF AGFLCSHALK ILMTLNIVTI  600
PDAYILKRWT KAAKTGNVCV SSESSQEMES KAKLSFRYKE LSYLYMQLMT KACECDEAYK  660
IAKDGFWKML EQMDASEIDC SKIKGIKVKE RVTYKSSKRP KSALEMATKK RKYKVKEKSS  720
SKRLQV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G15090.1	1e-136	FAR1 family protein