PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027157484.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | B3 | ||||||||
Protein Properties | Length: 219aa MW: 24427.9 Da PI: 6.7101 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 53 | 6.1e-17 | 35 | 125 | 1 | 99 |
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 f+k +++s+v k +l+lp+ f++ h + ++t++lede+ +++ k+ ++++ l++GW +F a++L egD++vF++++ +l+v XP_027157484.1 35 FVKPMIRSNVKKGFWLSLPRLFCKLHLPD--HDTTIVLEDENRKEYITKY--LAQRRG--LSAGWMGFSIAHKLVEGDVLVFHMVN--ANKLKVY 121 89*********************999433..5679***************..666655..9**********************765..5556898 PP EE-S CS B3 96 vfrk 99 v+r+ XP_027157484.1 122 VIRS 125 8886 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 219 aa Download sequence |
MVGMHDLCGQ IKVTSSVMQR AEAVQETLDA KFPSFVKPMI RSNVKKGFWL SLPRLFCKLH 60 LPDHDTTIVL EDENRKEYIT KYLAQRRGLS AGWMGFSIAH KLVEGDVLVF HMVNANKLKV 120 YVIRSSRLAE VDAALCLLQL EGPATGNESG HRGDDCGDPQ PTGEKSKSCS QPECENISDK 180 DMLDNNLGLV MGRPESIDEH LQLALEGRRG SFSGLHYRD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G19184.1 | 9e-38 | B3 family protein |