PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027156997.1

Organism

Coffea eugenioides

Taxonomic ID

49369

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

FAR1

Protein Properties

Length: 325aa MW: 37446.9 Da PI: 8.4781

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027156997.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	72.1	1.3e-22	70	158	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 +fY++Y k+ GF +r sk +k k+++ + ++ f+Cs egkr ++k++ + +r+etr++C a++k++ ++ gk++v +++ eHnHel+ XP_027156997.1 70 NFYQKYVKTSGFGTRLSKGHKDKNSDMMLDKIFCCSHEGKRPRDKRN-MIVKCPRPETRCDCGARIKISCRQAGKYRVVQFVAEHNHELS 158 6****************************************9999.99999*********************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 325 aa Download sequence
MENGLPTHKI QSCRKLDFED VDLQEINDNA LPLCITDGNQ ENQIFLHLAI PDDFVPKLGM 60 KFDTKVAVRN FYQKYVKTSG FGTRLSKGHK DKNSDMMLDK IFCCSHEGKR PRDKRNMIVK 120 CPRPETRCDC GARIKISCRQ AGKYRVVQFV AEHNHELSTP SKTHLFKSHR HMTMAHEAEI 180 DMTRNYEIAP KQSIELISKQ VGGRENLGFI RDDLKNYLRS KRSIPMMQGD TGGILEYLHR 240 MQLEDPNFYY AIQVDKDDLI TNIFWADAKM RMNFAHFGDV VCSDTTYRKH KDGRPIALFV 300 GVNHHKQTTV FGAALLNDET IGTFE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-56	FAR1 family protein