PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027156714.1

Organism

Coffea eugenioides

Taxonomic ID

49369

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

HSF

Protein Properties

Length: 374aa MW: 43152.3 Da PI: 5.5321

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027156714.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	98.8	5.4e-31	47	139	2	103
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 Fl+k+++++ed+e++++isws n++sf ++d+ +f+ ++Lpk F+h nf+SFv QLn YgFkk++ ++ e+++++F++gk++ll++ XP_027156714.1 47 FLMKTFDMIEDPETNSIISWSPNSTSFTIWDQIKFTAELLPKNFRHGNFSSFVYQLNNYGFKKISWDK---------FEYENPWFQAGKRHLLKH 132 9***************************************************************99.........67************ PP XXXXXXX CS HSF_DNA-bind 97 ikrkkse 103 ikr++++ XP_027156714.1 133 IKRRNQQ 139 **985 PP

Sequence ? help Back to Top
Protein Sequence Length: 374 aa Download sequence
MQGKRKAIAD TGGDNGDGGG AGGYGGNTRG IGPLPRRRRI RSFPPPFLMK TFDMIEDPET 60 NSIISWSPNS TSFTIWDQIK FTAELLPKNF RHGNFSSFVY QLNNYGFKKI SWDKFEYENP 120 WFQAGKRHLL KHIKRRNQQC EYDSVIQPSC GSTDNLLKDR MEDQLETLMI EQHGLKVELE 180 KLNEKQKQMV NHFNKIEESI KVSEREKEEM VSQLLVQVFI QKLREKREMS KYEATKNQEL 240 DNSTRKEILE LVAEGNCSRH IDKNKQVQEE VMVIQTEGQT FCPPDNSGGS NQEKKATATS 300 ETYQNRDFWK KMIEDGSEHE NGGHEELEEY HPKAILKLQD LIASNTLVQG ENQEEKPVTV 360 MEDQDGVSEN MHLE

Sequence ? help Back to Top

Protein Sequence Length: 374 aa Download sequence

MQGKRKAIAD TGGDNGDGGG AGGYGGNTRG IGPLPRRRRI RSFPPPFLMK TFDMIEDPET  60
NSIISWSPNS TSFTIWDQIK FTAELLPKNF RHGNFSSFVY QLNNYGFKKI SWDKFEYENP  120
WFQAGKRHLL KHIKRRNQQC EYDSVIQPSC GSTDNLLKDR MEDQLETLMI EQHGLKVELE  180
KLNEKQKQMV NHFNKIEESI KVSEREKEEM VSQLLVQVFI QKLREKREMS KYEATKNQEL  240
DNSTRKEILE LVAEGNCSRH IDKNKQVQEE VMVIQTEGQT FCPPDNSGGS NQEKKATATS  300
ETYQNRDFWK KMIEDGSEHE NGGHEELEEY HPKAILKLQD LIASNTLVQG ENQEEKPVTV  360
MEDQDGVSEN MHLE

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	130	136	LKHIKRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G54070.1	1e-35	HSF family protein