PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027156576.1

Organism

Coffea eugenioides

Taxonomic ID

49369

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

FAR1

Protein Properties

Length: 843aa MW: 97594.1 Da PI: 8.2906

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027156576.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	65.9	1.1e-20	85	175	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 +fYn YAk GF +rks+ k+ ++g r++vC +eg+r+e+ + ++++r+ +a trtgC a+++vk ++ + k++vt++ eHnH+la XP_027156576.1 85 EFYNLYAKLSGFGIRKSNAKRD-EDGISRFRKWVCCCEGYRNEKWFNyEDRKREAKAITRTGCGACFRVKYDTeSVKYVVTRFIMEHNHPLA 175 6**************98887.8898999********9988767889999*************9899************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 843 aa Download sequence
MGQDGVLKTH DMVQETEKGK MGMDGCGRLM SFDLNQEPEC DRDTCSEESG GSIGGHEDEE 60 ADELVGAIGV DDVMKLTFDT EEAGEFYNLY AKLSGFGIRK SNAKRDEDGI SRFRKWVCCC 120 EGYRNEKWFN YEDRKREAKA ITRTGCGACF RVKYDTESVK YVVTRFIMEH NHPLASEASV 180 QHLRSHRKVS DAEYAQAKSL KLVGARICQI MKHFVIKAGG YSNVGFCIKD LYNRMDEERR 240 KDIFNGDAEG ALGFLAAKKD ADDMFFYKYH VDNEGRLAML FWADSKSRAD FSVFGDVLVF 300 DTTYKTNKYR KPLVVLAGVN NHLNSTVFGC ALLSDERIET YEWVLSTFVE AMKGRKPVAV 360 MTDGDSAMRR AIKNLLPDAC HRLCSWHLHR NARSNIRCEE FNNRFYNLMA RKCSTLEFED 420 RWARLVNECG VVENEWVKKL YRRRRLWAEA YLRGHFFAGM RSTQRCEKMN AFLNEYLNEK 480 MRLYEFVRSF DLAIAWLRHT ESKAVHTSEN TKPVLTTILP ELEGSAAEVF TRNVFFMVRK 540 HLNRQGLLIS EGWSEDGGNR TYYYSKYGGH EISWRVDYDR SMEKLICSCM KFESKGIPCA 600 HMFRVMVVEG MNRIPEACIS KRWTKGVHCS NNGMKEFVAD EQLTQMARYG TLKSSCNTMC 660 YYASYMDDAF NDLQQMFDKH SVDLKEKWID RGYGGDGFAM DSRVRNDRSR RTFGLLDPRV 720 SRCKGDHKHA EAKKKRKCGH CRYYRNCILT NDLTCDIWVE DCKQATTNEH AHTKRIRTTQ 780 QLMMIIWKTV WMTRWKNHLK LVRAAATQAN GEDKHLYHNH SVAVEGTQVA NKEVQEKDEA 840 LLL

Sequence ? help Back to Top

Protein Sequence Length: 843 aa Download sequence

MGQDGVLKTH DMVQETEKGK MGMDGCGRLM SFDLNQEPEC DRDTCSEESG GSIGGHEDEE  60
ADELVGAIGV DDVMKLTFDT EEAGEFYNLY AKLSGFGIRK SNAKRDEDGI SRFRKWVCCC  120
EGYRNEKWFN YEDRKREAKA ITRTGCGACF RVKYDTESVK YVVTRFIMEH NHPLASEASV  180
QHLRSHRKVS DAEYAQAKSL KLVGARICQI MKHFVIKAGG YSNVGFCIKD LYNRMDEERR  240
KDIFNGDAEG ALGFLAAKKD ADDMFFYKYH VDNEGRLAML FWADSKSRAD FSVFGDVLVF  300
DTTYKTNKYR KPLVVLAGVN NHLNSTVFGC ALLSDERIET YEWVLSTFVE AMKGRKPVAV  360
MTDGDSAMRR AIKNLLPDAC HRLCSWHLHR NARSNIRCEE FNNRFYNLMA RKCSTLEFED  420
RWARLVNECG VVENEWVKKL YRRRRLWAEA YLRGHFFAGM RSTQRCEKMN AFLNEYLNEK  480
MRLYEFVRSF DLAIAWLRHT ESKAVHTSEN TKPVLTTILP ELEGSAAEVF TRNVFFMVRK  540
HLNRQGLLIS EGWSEDGGNR TYYYSKYGGH EISWRVDYDR SMEKLICSCM KFESKGIPCA  600
HMFRVMVVEG MNRIPEACIS KRWTKGVHCS NNGMKEFVAD EQLTQMARYG TLKSSCNTMC  660
YYASYMDDAF NDLQQMFDKH SVDLKEKWID RGYGGDGFAM DSRVRNDRSR RTFGLLDPRV  720
SRCKGDHKHA EAKKKRKCGH CRYYRNCILT NDLTCDIWVE DCKQATTNEH AHTKRIRTTQ  780
QLMMIIWKTV WMTRWKNHLK LVRAAATQAN GEDKHLYHNH SVAVEGTQVA NKEVQEKDEA  840
LLL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	441	446	YRRRRL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-97	FAR1 family protein