PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027156346.1
Organism
Coffea eugenioides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family NAC
Protein Properties Length: 284aa    MW: 31974.3 Da    PI: 5.1547
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027156346.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM639e-20229354128
             NAM  54 eekewyfFskrdkkyatgkrknr.atksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                     + + wyfF+   +ky++g+r++r   + g+Wk tgkdk+++  +g++vg +k+L f       gekt W mheyr+
  XP_027156346.1  22 NVNGWYFFTYLTNKYPKGSRPSRsCGDGGFWKPTGKDKKIYY-NGNTVGYRKSLDFLL---GPGEKTAWKMHEYRI 93 
                     4579*******************666799*************.999***********5...45678********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 284 aa     Download sequence    
MRFGVRGFLI DAHRYRSDSL HNVNGWYFFT YLTNKYPKGS RPSRSCGDGG FWKPTGKDKK  60
IYYNGNTVGY RKSLDFLLGP GEKTAWKMHE YRIHANNPKS DPVLCRLYMN IRRKNKDESE  120
GDTVELMREN LDQCFTVNEA PMQNEDNDLA VGNISSAGST NNQCMEYITS TLDTGGDAIS  180
NQNEDNDLAV GNISSAGSTN NQCMEYITST LDTGGDAISN QVIYDLSSFQ FPDHPFQDFQ  240
GYTNSHGGLE AITQEFTEPF HLSKGTMIFE YGTVPFIKGY HDPL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27410.26e-19NAC family protein