PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027156322.1
Organism
Coffea eugenioides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family NAC
Protein Properties Length: 524aa    MW: 59684.3 Da    PI: 4.8615
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027156322.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM107.91.2e-33682191128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk............................kvkaeekewyfFskrdkk 67 
                     +p+G+rF Ptdeel+v+yL+k++++ +l+l + i+e+++y ++P++L +                               ++ + wyfF+   +k
  XP_027156322.1  68 MPRGYRFCPTDEELIVHYLRKRIAKAPLPL-NRIHEANVYGHNPQELTMtvdhentiiiemrfgvrgflidahryisDSLHNVNGWYFFTYLTNK 161
                     699***************************.77**************8558999*******99999999988876542223677*********** PP

             NAM  68 yatgkrknr.atksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                     y++g+r++r   + g+Wk tgkdk+++  +g++vg +k+L f       gekt W mheyr+
  XP_027156322.1 162 YPKGSRPSRsCGDGGFWKPTGKDKKIYY-NGNTVGYRKSLDFLL---GPGEKTAWKMHEYRI 219
                     *********666799*************.999***********5...45678********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 524 aa     Download sequence    
MDNHQQQREE QPYLLHDHLL HHHWPPLQGQ QQQPLQHQHP LYLLNDQQQP VPQGKILHEN  60
SQNFLDSMPR GYRFCPTDEE LIVHYLRKRI AKAPLPLNRI HEANVYGHNP QELTMTVDHE  120
NTIIIEMRFG VRGFLIDAHR YISDSLHNVN GWYFFTYLTN KYPKGSRPSR SCGDGGFWKP  180
TGKDKKIYYN GNTVGYRKSL DFLLGPGEKT AWKMHEYRIH ANNPKSDPVL CRLYMNIRRK  240
KKDESEGDTV ELMRENLDQC FTVNEAPMQN EDNDLAVGNI SSAGSTNNQC MEYITSTLDT  300
GGDANSNQVI YDLSSFQFPD HPFQDFQGYT NSHGGLEAIT QEFTEPFDLS KGTMMPSNLS  360
MEPFHLSRGT MIPSDLNMED VSKYATGDTV ELMRENLDQC LTVNEAPMQN EDNDLAVGNI  420
SSAGSTNNQC MEYITSTLDT GGDAISNQVI YDLSSFQFPD HPFQDFQGYT NSHGGLEAIT  480
QEFTEPFHLS RGTMIPSDLN MEDVSKYAIG GTDLSDLAWQ IMSI
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1238243RRKKKD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69490.13e-29NAC family protein