PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027156293.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | FAR1 | ||||||||
Protein Properties | Length: 253aa MW: 28901.5 Da PI: 7.1201 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 91.9 | 8e-29 | 89 | 176 | 2 | 91 |
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 fYn+YA++vGF +r+sk ++s+r+g+ + r +vC+keg+r ++k++ k r+raetr+gC+a++ v+k ++g+w+vtk+++eH+H+l+p XP_027156293.1 89 FYNSYATRVGFIIRVSKLSRSRRDGSAIGRALVCNKEGFRMPDKRE--KIVRQRAETRVGCRAMILVRKISSGRWVVTKFVKEHTHPLNP 176 ******************************************9988..9**************************************975 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 253 aa Download sequence |
MEFEVDVDVN GEVVGSSVDI DGRTDDENAT AGSPVDGVLQ HCPDVKVDQH VSRREIVELE 60 ETQAVNSLVS NDEPYVGQEF ESEAAAHAFY NSYATRVGFI IRVSKLSRSR RDGSAIGRAL 120 VCNKEGFRMP DKREKIVRQR AETRVGCRAM ILVRKISSGR WVVTKFVKEH THPLNPGKGR 180 KDLIYDQYPN EHDKIRELSQ QLAVEKKRAA TYKRHLEMIF EHIEEHNLSL SKKIQDVVNN 240 VREIESKEHQ SHR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G59470.2 | 1e-104 | FAR1 family protein |