PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027156249.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | NAC | ||||||||
Protein Properties | Length: 124aa MW: 14329.2 Da PI: 9.5489 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 33.4 | 1.3e-10 | 23 | 75 | 74 | 128 |
NAM 74 knratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 n t +gyW t k++++ +g++ g kk +++++g+++ g++t+W++ ++rl XP_027156249.1 23 DNVFTGDGYWTPTSA-KAIYT-GGQADGYKKEFIYHRGTEHPGKRTNWCIYQFRL 75 455799******977.99999.99*****************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 124 aa Download sequence |
MSKDSCEYST GEKWFFNTVA PNDNVFTGDG YWTPTSAKAI YTGGQADGYK KEFIYHRGTE 60 HPGKRTNWCI YQFRLNPDVY VANAIGNTVE YKISSIVACM VFRKEAVVQS NRRKRKREKE 120 LMSF |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 112 | 117 | RRKRKR |
2 | 112 | 119 | RRKRKREK |
3 | 113 | 120 | RRKRKREK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G52890.1 | 2e-08 | NAC family protein |