PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027155842.1

Organism

Coffea eugenioides

Taxonomic ID

49369

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

NAC

Protein Properties

Length: 396aa MW: 45335.3 Da PI: 6.2856

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027155842.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	116.9	2e-36	68	195	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvka....eekewyfFskrdkkyatgkrknr.atksgyWkatgkdk 90 +p+G+rF Ptdeel+v+yL+k++++ +l+l + i+e+++y ++P++L +++++ + + wyfF+ +ky++g+r++r + g+Wk tgkdk XP_027155842.1 68 MPRGYRFCPTDEELIVHYLRKRIAKAPLPL-NRIHEANVYGHNPQELTNRYRSdslhNVNGWYFFTYLTNKYPKGSRPSRsCGDGGFWKPTGKDK 161 699*************************.77**********9644443343667****************666799***** PP NAM 91 evlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 +++ +g++vg +k+L f gekt W mheyr+ XP_027155842.1 162 KIYY-NGNTVGYRKSLDFLL---GPGEKTAWKMHEYRI 195 .999*******5...45678******97 PP

Sequence ? help Back to Top
Protein Sequence Length: 396 aa Download sequence
MDNHQQQREE QPYLLHDHLL HHHWPPLQGQ QQQPLQHQHP LYLLNDQQQP VQQGIILHEN 60 SQNFLDSMPR GYRFCPTDEE LIVHYLRKRI AKAPLPLNRI HEANVYGHNP QELTNRYRSD 120 SLHNVNGWYF FTYLTNKYPK GSRPSRSCGD GGFWKPTGKD KKIYYNGNTV GYRKSLDFLL 180 GPGEKTAWKM HEYRIHANNP KSDPVLCRLY MNIRRKKKDE SEGDTVELMR ENLDQCFTVN 240 EAPMQNEDND LAVGNISSAG STNNQCMEYI TSTLDTGGDA NSNQVIYDLS SFQFPDHPFQ 300 DFQGYTNSHG GLEAITQEFT EPFHLSKGTM MPSNLSTEPF HLSRGTMIPS DLNMEDVSKY 360 AIGGTDLSDL AWQNGCAGGY VNMTSLQIDG ENSGYK

Sequence ? help Back to Top

Protein Sequence Length: 396 aa Download sequence

MDNHQQQREE QPYLLHDHLL HHHWPPLQGQ QQQPLQHQHP LYLLNDQQQP VQQGIILHEN  60
SQNFLDSMPR GYRFCPTDEE LIVHYLRKRI AKAPLPLNRI HEANVYGHNP QELTNRYRSD  120
SLHNVNGWYF FTYLTNKYPK GSRPSRSCGD GGFWKPTGKD KKIYYNGNTV GYRKSLDFLL  180
GPGEKTAWKM HEYRIHANNP KSDPVLCRLY MNIRRKKKDE SEGDTVELMR ENLDQCFTVN  240
EAPMQNEDND LAVGNISSAG STNNQCMEYI TSTLDTGGDA NSNQVIYDLS SFQFPDHPFQ  300
DFQGYTNSHG GLEAITQEFT EPFHLSKGTM MPSNLSTEPF HLSRGTMIPS DLNMEDVSKY  360
AIGGTDLSDL AWQNGCAGGY VNMTSLQIDG ENSGYK

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	214	219	RRKKKD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69490.1	4e-33	NAC family protein